Gene omics information

Query gene ID	Zm.2234.1.S1_a_at
Gene name	hypothetical protein LOC100276749 /// hypothetical protein LOC100276758
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.2	Zm.2234.1.S1_a_at	CO526542	hypothetical protein LOC100276749 /// hypothetical protein LOC100276758	-	2e+1	At5g53486	unknown protein	S.X.	H.G.	Please select
0.60	77.8	Zm.10063.1.A1_at	BM378869	homeobox protein HD1	-	1e-12	At4g32040	KNAT5 (KNOTTED1-LIKE HOMEOBOX GENE 5)	S.X.	H.G.	Please select
0.55	71.6	Zm.4239.1.A1_at	BM080569	hypothetical protein LOC100193561	-	2e+0	At5g04820	OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13)	S.X.	H.G.	Please select
0.50	65.7	Zm.301.2.A1_at	CO521836	hypothetical protein LOC100276367	-	4e-9	At2g34510	-	S.X.	H.G.	Please select
0.38	44.2	Zm.4308.1.A1_at	AY112093.1	-	-	1e-1	At1g08390	nucleic acid binding	S.X.	H.G.	Please select
0.31	31.6	Zm.18237.1.S1_at	CN845290	mitochondrial carrier protein CGI-69	-	3e-6	At4g27940	mitochondrial substrate carrier family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.1	95.9	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.6	95.2	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.6	95.2	GSM290556	CCR mutant M2 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
3.6	95.2	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.5	95.1	GSM206323	Left pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM206330	Lower pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM206318	Lower pulvinus 2 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.3	94.7	GSM206321	Lower pulvinus 30 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.3	94.7	GSM206314	Upper pulvinus 15 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.2	94.5	GSM206312	Upper pulvinus 2 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	1e-50	198	Zm.2234.3.A1_a_at	CO526105	hypothetical protein LOC100273895	-	9e-9	At4g17180	glycosyl hydrolase family 17 protein	C.G.	S.X.	Please select
0.12	1e-50	198	Zm.2234.3.A1_at	CO526105	hypothetical protein LOC100273895	-	9e-9	At4g17180	glycosyl hydrolase family 17 protein	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.4336.1.S1_at	CA403908	hypothetical protein LOC100274309	-	4e+0	At5g38580	-	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.16296.1.A1_at	BM266683	delta-7-sterol-C5	-	8e-16	At3g02580	STE1 (STEROL 1)	C.G.	S.X.	Please select
0.01	7e+0	30	Zm.7572.2.S1_at	AY105643.1	hypothetical protein LOC100191376	-	8e-13	At1g02090	FUS5 (FUSCA 5)	C.G.	S.X.	Please select
0.02	7e+0	30	Zm.7572.1.S1_at	CO521006	COP9 signalosome complex subunit 7	-	2e-10	At1g02090	FUS5 (FUSCA 5)	C.G.	S.X.	Please select
0.01	7e+0	30	Zm.7331.1.S1_at	CA831696	kinesin heavy chain	-	5e-13	At2g36200	kinesin motor protein-related	C.G.	S.X.	Please select
0.01	7e+0	30	Zm.6451.1.S1_at	AY107195.1	-	-	2e-11	At1g59750	ARF1 (AUXIN RESPONSE FACTOR 1)	C.G.	S.X.	Please select
0.01	7e+0	30	Zm.17175.1.A1_at	CO526696	hypothetical protein LOC100273291	-	5e-11	At1g65560	allyl alcohol dehydrogenase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+1	30	Arabidopsis thaliana	At5g53486	5008306	unknown protein	F:unknown;P:unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e+0	32	Glycine max	HgAffx.14124.1.S1_at	CB826176	-	-	4e+0	At4g31870	ATGPX7 (glutathione peroxidase 7)	C.G.	S.X.	Please select
0.05	6e-4	44	Hordeum vulgare	Contig19828_at	Contig19828	-	-	3e-11	At4g17180	glycosyl hydrolase family 17 protein	C.G.	S.X.	Please select
0.06	2e-6	54	Oryza sativa	Os09g0272300	AK102527.1	-	Glycoside hydrolase, family 17 protein	7e-11	At4g17180	glycosyl hydrolase family 17 protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.93358.1.A1_at	DN487690	-	-	6e-1	At5g57060	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	5e+0	32	Triticum aestivum	Ta.2643.3.S1_a_at	CA603359	-	-	9e-1	At1g71790	F-actin capping protein beta subunit family protein	C.G.	S.X.	Please select
0.03	3e-1	34	Vitis vinifera	1607692_at	CF210102	-	-	1e+0	At2g14760	basic helix-loop-helix protein / bHLH protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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