Gene omics information

Query gene ID	Zm.2190.1.A1_at
Gene name	hypothetical protein LOC100276270
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	55.7	Zm.2190.1.A1_at	BG841211	hypothetical protein LOC100276270	-	6e+0	At5g05930	guanylyl cyclase-related (GC1)	S.X.	H.G.	Please select
0.40	48.5	Zm.11732.1.A1_at	BM380298	-	-	2e+1	At3g56710	SIB1 (SIGMA FACTOR BINDING PROTEIN 1)	S.X.	H.G.	Please select
0.29	28.1	Zm.9652.1.A1_at	CO522327	-	-	2e+0	At3g10940	protein phosphatase-related	S.X.	H.G.	Please select
0.21	15.5	Zm.11849.1.A1_at	BM381236	hypothetical protein LOC100193472	-	2e+0	At1g64930	CYP89A7	S.X.	H.G.	Please select
0.07	2.9	Zm.8809.1.A1_at	BM266818	-	-	2e-5	At5g43340	PHT6	S.X.	H.G.	Please select
0.07	2.9	Zm.10824.1.A1_at	AY112360.1	hypothetical protein LOC100192632	-	4e-23	At1g77810	galactosyltransferase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.4	99.0	GSM258535	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
13.1	98.7	GSM258533	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
11.4	98.5	GSM258537	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
10.5	98.4	GSM258538	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
7.2	97.8	GSM258531	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 1	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
7.1	97.7	GSM258185	Oh43 11-day seedling aerial tissue biological replicate 2	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
6.6	97.6	GSM258191	B73 11-day seedling aerial tissue biological replicate 3	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
6.5	97.5	GSM258534	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
6.4	97.5	GSM258197	Oh43xB73 11-day seedling aerial tissue biological replicate 3	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
6.4	97.5	GSM258536	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.19	1e-8	59	Zm.15330.1.A1_at	CB350785	hypothetical protein LOC100278759	-	4e+0	At3g12955	auxin-responsive protein-related	C.G.	S.X.	Please select
0.04	1e-5	50	Zm.9377.1.A1_at	AY109233.1	hypothetical protein LOC100275736	-	4e-1	At3g10610	40S ribosomal protein S17 (RPS17C)	C.G.	S.X.	Please select
0.02	5e-5	48	Zm.12234.1.A1_at	CD448336	-	-	7e-4	At2g33860	ETT (ETTIN)	C.G.	S.X.	Please select
0.03	7e-4	44	Zm.12681.1.S1_at	CA399688	hypothetical protein LOC100278755	-	2e+0	At5g65670	IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9)	C.G.	S.X.	Please select
0.02	3e-3	42	Zm.5530.2.A1_at	BE638786	-	-	1e-3	At2g33860	ETT (ETTIN)	C.G.	S.X.	Please select
0.04	3e-3	42	Zm.15359.1.S1_at	CO531510	-	-	2e+0	At2g05260	lipase class 3 family protein	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.2806.2.A1_at	CF011861	-	-	6e-4	At2g33860	ETT (ETTIN)	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.2806.2.S1_at	CF011861	-	-	6e-4	At2g33860	ETT (ETTIN)	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.2806.1.A1_a_at	AW067337	-	-	6e-1	At2g41660	MIZ1 (mizu-kussei 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e+0	32	Arabidopsis thaliana	At5g05930	830478	guanylyl cyclase-related (GC1)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	6e-13	75	Glycine max	Gma.1909.1.S1_at	AW306179	-	-	5e-1	At3g28420	unknown protein	C.G.	S.X.	Please select
0.07	2e-19	95	Hordeum vulgare	Contig20219_at	Contig20219	-	-	1e-2	At3g24770	CLE41 (CLAVATA3/ESR-RELATED 41)	C.G.	S.X.	Please select
0.02	2e-1	38	Oryza sativa	Os04g0352200	AK103395.1	-	Conserved hypothetical protein	2e+0	At4g38060	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	2e-13	77	Populus trichocarpa	PtpAffx.207927.1.S1_at	pmrna15733	hypothetical protein	-	2e+0	At4g18975	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	2e-15	83	Triticum aestivum	Ta.16590.1.S1_at	CA609185	-	-	2e+0	At3g17670	binding	C.G.	S.X.	Please select
0.06	5e-13	73	Vitis vinifera	1618399_at	CF214752	-	-	2e-1	At2g33860	ETT (ETTIN)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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