CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.2157.7.S1_at

Gene name ribosomal protein S11

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.2157.7.S1_at CF019402 ribosomal protein S11 - 1e-38 At4g30800 40S ribosomal protein S11 (RPS11B) S.X. H.G.
0.67 85.8 Zm.2157.8.S1_at BI096578 Hypothetical protein LOC100193584 - 8e-1 At3g66654 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein S.X. H.G.
0.61 79.5 Zm.3657.1.A1_s_at BG874068 - - 1e+0 At5g42635 glycine-rich protein S.X. H.G.
0.50 65.7 Zm.12150.2.S1_at AI619383 hypothetical protein LOC100273319 - 9e-1 At4g31340 myosin heavy chain-related S.X. H.G.
0.34 37.2 Zm.10174.1.A1_at AY111125.1 - - 4e+0 At2g47370 - S.X. H.G.
0.32 33.4 Zm.6916.1.S1_at AW067358 hypothetical protein LOC100273981 - 9e-13 At5g66750 CHR1 (CHROMATIN REMODELING 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.5 95.1 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.1 94.3 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.0 94.0 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9 93.8 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.8 93.5 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.8 93.5 GSM253255 ZM_24h_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
2.8 93.5 GSM205431 Mo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
2.6 92.9 GSM205424 Mo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
2.4 92.2 GSM253244 ZM_12h_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
2.4 92.2 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.58 0 819 Zm.2157.1.A1_a_at CA452419 ribosomal protein S11 - 4e-39 At4g30800 40S ribosomal protein S11 (RPS11B) C.G. S.X.
0.53 3e-139 494 Zm.2157.5.A1_x_at CK348105 ribosomal protein S11 - 2e-35 At5g23740 RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) C.G. S.X.
0.02 2e-1 36 Zm.19221.1.S1_at CO524032 - - 5e-8 At1g11545 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative C.G. S.X.
0.01 7e-1 34 Zm.5696.1.A1_at AW067308 hypothetical protein LOC100274101 - 2e-8 At5g45430 protein kinase, putative C.G. S.X.
0.03 7e-1 34 Zm.5396.1.A1_at AY112168.1 hypothetical protein LOC100216913 - 8e-5 At1g53645 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.03 7e-1 34 Zm.5396.1.S1_at AY112168.1 Hypothetical protein LOC100216913 - 8e-5 At1g53645 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.01 7e-1 34 Zm.534.1.A1_at AF276086.1 protein kinase AKINbetagamma-2 - 3e-10 At1g09020 SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4) C.G. S.X.
0.01 7e-1 34 Zm.534.1.A1_x_at AF276086.1 protein kinase AKINbetagamma-2 - 3e-10 At1g09020 SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4) C.G. S.X.
0.01 7e-1 34 Zm.4264.2.S1_at CK985545 hypothetical protein LOC100273380 - 2e-1 At3g19140 protein binding / zinc ion binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.53 1e-38 161 Arabidopsis thaliana At4g30800 829203 40S ribosomal protein S11 (RPS11B) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;MOBAFP - - - C.G. S.X.
0.53 3e-58 226 Glycine max GmaAffx.92522.1.S1_at CF808247 Ribosomal protein S11 mRNA, 3' end - 1e-24 At5g23740 RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) C.G. S.X.
0.41 2e-78 291 Hordeum vulgare Contig14638_at Contig14638 - - 4e-35 At4g30800 40S ribosomal protein S11 (RPS11B) C.G. S.X.
0.49 3e-179 628 Oryza sativa Os.12042.1.S1_at - - - 0 C.G. S.X.
0.40 2e-34 147 Populus trichocarpa Ptp.4316.1.S1_a_at CV270819 hypothetical protein - 5e-47 At5g23740 RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) C.G. S.X.
0.67 0 745 Triticum aestivum TaAffx.112443.2.S1_at CA627380 - - 4e-28 At3g48930 EMB1080 (embryo defective 1080) C.G. S.X.
0.41 2e-58 224 Vitis vinifera 1609509_at CF206236.1 - - 1e-50 At3g48930 EMB1080 (embryo defective 1080) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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