CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.2102.1.A1_at

Gene name hypothetical protein LOC100274069

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 55.7 Zm.2102.1.A1_at AW267527 hypothetical protein LOC100274069 - 3e-3 At2g32080 PUR ALPHA-1 S.X. H.G.
0.50 65.7 ZmAffx.742.1.S1_at AI740139 - - 3e+0 At1g10650 protein binding / zinc ion binding S.X. H.G.
0.44 55.7 ZmAffx.559.1.A1_at AI714543 - - 3e+0 At5g48970 mitochondrial substrate carrier family protein S.X. H.G.
0.40 48.5 Zm.14437.2.S1_at AI600681 RNA binding protein - 3e+0 At5g66010 RNA binding / nucleic acid binding / nucleotide binding S.X. H.G.
0.40 48.5 ZmAffx.743.1.S1_at AI745735 - - 8e-1 At4g28170 unknown protein S.X. H.G.
0.40 48.5 ZmAffx.1194.1.A1_at BE025369 - - 4e+0 At5g59990 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.3 96.9 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.8 96.6 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.8 96.6 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
4.7 96.5 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.5 96.3 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.4 96.2 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.2 96.0 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.9 95.7 GSM205367 Mo17xB73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.9 95.7 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.9 95.7 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-2 38 Zm.17624.1.S1_at CK368771 - - 3e-1 At5g23395 - C.G. S.X.
0.02 7e-2 38 Zm.14089.1.S1_at AW324724 hypothetical protein LOC100193909 - 4e-5 At5g48640 cyclin family protein C.G. S.X.
0.01 5e+0 32 Zm.6893.1.A1_at AY106996.1 hypothetical protein LOC100274696 - 3e+0 At5g50820 anac097 (Arabidopsis NAC domain containing protein 97) C.G. S.X.
0.01 5e+0 32 Zm.501.1.S1_at U43034.2 permease 1 - 3e-1 At1g65550 xanthine/uracil permease family protein C.G. S.X.
0.02 5e+0 32 Zm.4563.1.A1_at AI734806 - - 2e-1 At5g23920 unknown protein C.G. S.X.
0.00 5e+0 32 Zm.370.1.S1_at AF023159.1 starch synthase DULL1 - 1e-21 At1g11720 ATSS3 (starch synthase 3) C.G. S.X.
0.02 5e+0 32 Zm.3015.2.S1_x_at AI714422 translational initiation factor eIF-4A - 3e+0 At4g13142 C.G. S.X.
0.01 5e+0 32 Zm.11932.1.A1_at BM381964 - - 6e-1 At5g27690 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 5e+0 32 Zm.10213.2.S1_a_at CF038860 hypothetical protein LOC100191576 /// seed maturation protein - 4e-2 At4g23630 BTI1 (VIRB2-INTERACTING PROTEIN 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 3e-3 44 Arabidopsis thaliana At2g32080 817768 PUR ALPHA-1 similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication - - - C.G. S.X.
0.24 2e-29 131 Glycine max Gma.5244.3.S1_a_at BM893397 - - 1e-32 At2g32080 PUR ALPHA-1 C.G. S.X.
0.61 4e-136 484 Hordeum vulgare Contig7564_at Contig7564 - - 4e-5 At2g32080 PUR ALPHA-1 C.G. S.X.
0.64 0 894 Oryza sativa Os01g0260700 CB659887 - PUR-alpha/beta/gamma, DNA/RNA-binding familyprotein 3e-12 At2g32080 PUR ALPHA-1 C.G. S.X.
0.08 1e-9 65 Populus trichocarpa PtpAffx.159533.1.A1_at CV269395 hypothetical protein - 2e-15 At2g32080 PUR ALPHA-1 C.G. S.X.
0.59 6e-137 488 Triticum aestivum Ta.4232.1.S1_s_at CK169440 - - 5e-5 At2g32080 PUR ALPHA-1 C.G. S.X.
0.07 1e-2 40 Vitis vinifera 1615027_s_at CB977478 hypothetical protein LOC100246785 - 1e-15 At2g32080 PUR ALPHA-1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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