Gene omics information

Query gene ID Zm.2093.1.S1_at
Gene name HMG type nucleosome/chromatin assembly factor D
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6179.5Zm.2093.1.S1_atAF440223.1HMG type nucleosome/chromatin assembly factor D-2e+0At5g63740zinc finger protein-relatedS.X.H.G.
0.6179.5Zm.3452.1.S1_atCF021767hypothetical protein LOC100275172 /// hypothetical protein LOC100278225-6e+0Atmg00740-S.X.H.G.
0.5674.4Zm.5803.1.A1_atAI691266--2e+0At5g45370nodulin-related / integral membrane family proteinS.X.H.G.
0.5065.7Zm.2007.1.A1_atAY105117.1--2e-11At4g34100protein binding / zinc ion bindingS.X.H.G.
0.5065.7Zm.14628.1.A1_atBM075532--8e+0At3g19790unknown proteinS.X.H.G.
0.4861.3Zm.13678.1.A1_atAW573532hypothetical protein LOC100276192-3e-1At1g12890AP2 domain-containing transcription factor, putativeS.X.H.G.
0.3844.2Zm.536.1.S1_atAF287341.1ribosomal protein S10-2e+0At3g22300RPS10 (RIBOSOMAL PROTEIN S10)S.X.H.G.
0.3538.9Zm.16642.1.A1_atCN845309--6e+0At1g23080PIN7 (PIN-FORMED 7)S.X.H.G.
0.3336.0Zm.3980.1.A1_atBM382313hypothetical protein LOC100274012-4e+0At4g22740glycine-rich proteinS.X.H.G.
0.3131.6Zm.7935.1.A1_atCD968070myb-like DNA-binding domain containing protein-5e+0At5g46720-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.798.3GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
9.098.2GSM202307B73xMo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
9.098.2GSM202306Mo17xB73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
8.798.1GSM202302B73xMo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.697.9GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.097.7GSM202296B73xMo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.997.7GSM202292B73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.597.5GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.297.4GSM202319Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
5.997.3GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-654Zm.6057.1.S1_atCD437092glycine-rich protein 2b-5e-1At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
0.046e-548Zm.14082.1.A1_s_atAF440222.1HMG-like nucleosome/chromatin assembly factor D-2e+0At3g06455splicing factor-relatedC.G.S.X.
0.046e-548Zm.14082.1.A1_atAF440222.1HMG-like nucleosome/chromatin assembly factor D-2e+0At3g06455splicing factor-relatedC.G.S.X.
0.041e-344Zm.6732.3.A1_atCD443875HMG1/2-like protein-7e-9At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)C.G.S.X.
0.031e-240Zm.6732.1.S1_s_atAF440221.1HMG-like nucleosome/chromatin assembly factor D-3e-11At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)C.G.S.X.
0.031e-240Zm.4881.1.A1_atCA404148High mobility group protein3-6e-1At2g19385zinc ion bindingC.G.S.X.
0.026e-238Zm.18443.1.A1_atCD568469--8e+0At4g16442integral membrane family proteinC.G.S.X.
0.036e-238Zm.13850.1.A1_atAJ295133.1--8e-1At5g48220indole-3-glycerol phosphate synthase, putativeC.G.S.X.
0.022e-136ZmAffx.721.1.A1_atAI665110hypothetical protein LOC100274867-3e+0At3g10980unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt5g63740836494zinc finger protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPVA---C.G.S.X.
0.033e-344Glycine maxGma.15947.1.S1_atCA783093--8e-1At5g56260dimethylmenaquinone methyltransferase family proteinC.G.S.X.
0.061e-344Hordeum vulgareContig2173_s_atContig2173--8e-6At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)C.G.S.X.
0.282e-33145Oryza sativaOs08g0101100AK069900.1-HMG1/2 (high mobility group) box family protein3e-2At2g42395unknown proteinC.G.S.X.
0.077e-136Populus trichocarpaPtpAffx.5420.1.A1_atDN494412high mobility group family-3e-2At5g23420HMGB6C.G.S.X.
0.285e-29129Triticum aestivumTa.14587.1.S1_atCK207741--8e-3At3g29370unknown proteinC.G.S.X.
0.093e-652Vitis vinifera1612070_atCF413850hypothetical protein LOC100247584-2e-11At5g23420HMGB6C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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