Gene omics information

Query gene ID	Zm.206.4.A1_x_at
Gene name	40S ribosomal subunit protein S21
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.206.4.A1_x_at	CF048188	40S ribosomal subunit protein S21	-	4e-16	At3g53890	40S ribosomal protein S21 (RPS21B)	S.X.	H.G.	Please select
0.67	85.8	Zm.11667.1.A1_at	CF633574	hypothetical protein LOC100274234	-	4e-1	At4g39630	unknown protein	S.X.	H.G.	Please select
0.60	77.8	Zm.10095.1.A1_at	CF633991	chloroplast small heat shock protein	-	2e+0	At3g57062	unknown protein	S.X.	H.G.	Please select
0.57	75.1	Zm.17839.1.S1_at	U12679.1	glutathione S-transferase2	-	1e-1	At4g02520	ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)	S.X.	H.G.	Please select
0.56	74.4	Zm.13720.1.S1_at	AY106348.1	-	-	1e-18	At3g18040	MPK9 (MAP KINASE 9)	S.X.	H.G.	Please select
0.50	65.7	Zm.16687.1.S1_at	CF636696	hypothetical protein LOC100194066	-	3e-3	At5g07250	ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)	S.X.	H.G.	Please select
0.50	65.7	Zm.17741.1.S1_at	CK370742	-	-	4e+0	At5g21430	DNAJ heat shock N-terminal domain-containing protein	S.X.	H.G.	Please select
0.47	59.9	Zm.19222.1.S1_at	CF624462	hypothetical protein LOC100194092	-	3e-3	At4g32720	AtLa1 (Arabidopsis thaliana La protein 1)	S.X.	H.G.	Please select
0.41	49.7	Zm.2308.1.A1_at	BG841336	hypothetical protein LOC100276079	-	2e-2	At5g66005	Expressed protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.1	95.9	GSM205431	Mo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.0	95.8	GSM205420	Mo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.9	95.7	GSM205434	Mo17xB73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.8	95.5	GSM205423	B73xMo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.7	95.4	GSM205422	Mo17xB73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.7	95.4	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.5	95.1	GSM205365	Mo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.4	94.9	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.4	94.9	GSM205424	Mo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.4	94.9	GSM205427	Mo17xB73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.84	0	769	Zm.206.4.A1_s_at	CF048188	ribosomal protein S21 /// 40S ribosomal subunit protein S21	-	4e-16	At3g53890	40S ribosomal protein S21 (RPS21B)	C.G.	S.X.	Please select
0.67	0	658	Zm.206.3.S1_a_at	Y09636.1	40S ribosomal subunit protein S21	-	5e-12	At3g53890	40S ribosomal protein S21 (RPS21B)	C.G.	S.X.	Please select
0.67	0	658	Zm.206.3.S1_x_at	Y09636.1	40S ribosomal subunit protein S21	-	5e-12	At3g53890	40S ribosomal protein S21 (RPS21B)	C.G.	S.X.	Please select
0.34	4e-116	416	Zm.207.1.S1_at	CF047698	ribosomal protein S21	-	1e-13	At3g53890	40S ribosomal protein S21 (RPS21B)	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.8293.1.S1_at	CF626174	harpin-induced protein	-	7e-1	At1g74560	NRP1 (NAP1-RELATED PROTEIN 1)	C.G.	S.X.	Please select
0.03	3e+0	32	ZmAffx.451.1.A1_at	AI677139	-	-	8e-1	At5g66740	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	32	ZmAffx.451.1.S1_at	AI677139	-	-	8e-1	At5g66740	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.9351.1.A1_a_at	CF630860	transport protein particle component, Bet3 containing protein /// transport protein particle component, Bet3 containing protein /// transport protein particle component, Bet3 containing protein	-	4e-20	At3g05000	transport protein particle (TRAPP) component Bet3 family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.9351.1.A1_at	CF630860	transport protein particle component, Bet3 containing protein	-	4e-20	At3g05000	transport protein particle (TRAPP) component Bet3 family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	4e-16	85	Arabidopsis thaliana	At3g53890	824556	40S ribosomal protein S21 (RPS21B)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-3	44	Glycine max	PsAffx.CL34Contig2_at	PsAffx.CL34Contig2	-	-	1e+0	At1g13690	ATE1	C.G.	S.X.	Please select
0.34	7e-69	260	Hordeum vulgare	Contig2584_at	Contig2584	-	-	1e-6	At3g53890	40S ribosomal protein S21 (RPS21B)	C.G.	S.X.	Please select
0.37	1e-64	248	Oryza sativa	Os03g0667800	CF320290	-	40S ribosomal protein S21	2e-8	At3g53890	40S ribosomal protein S21 (RPS21B)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.27	1e-14	81	Populus trichocarpa	Ptp.1356.1.S1_s_at	CX170395	hypothetical protein	-	4e-28	At3g53890	40S ribosomal protein S21 (RPS21B)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.58	2e-144	511	Triticum aestivum	Ta.17451.1.S1_at	CA620979	-	-	7e-8	At3g53890	40S ribosomal protein S21 (RPS21B)	C.G.	S.X.	Please select
0.16	2e-6	52	Vitis vinifera	1610997_at	CD719330	hypothetical protein LOC100266516	-	1e-13	At3g53890	40S ribosomal protein S21 (RPS21B)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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