CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.2059.1.S1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.2059.1.S1_at AI746127 - - 1e-86 At3g58610 ketol-acid reductoisomerase S.X. H.G.
0.67 85.8 Zm.16537.3.S1_at CA404068 hypothetical protein LOC100273170 - 2e-22 At3g04770 RPSAb (40S ribosomal protein SA B) S.X. H.G.
0.60 77.8 Zm.17980.1.A1_at CK828030 - - 7e-1 At1g19010 unknown protein S.X. H.G.
0.55 71.6 Zm.9182.1.A1_s_at BM267124 hypothetical protein LOC100278830 - 1e+0 At2g05803 unknown protein S.X. H.G.
0.44 55.7 Zm.18708.1.A1_at CO523461 - - 4e-1 At2g36485 - S.X. H.G.
0.44 55.7 Zm.19277.1.A1_at CO533311 hypothetical protein LOC100273292 - 2e-3 At1g18010 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.3 97.8 GSM205431 Mo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.9 97.7 GSM205427 Mo17xB73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.1 97.4 GSM205434 Mo17xB73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.9 97.3 GSM205424 Mo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.9 96.7 GSM205420 Mo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.9 96.7 GSM205425 B73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.8 96.6 GSM205423 B73xMo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.8 96.6 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.7 96.5 GSM205368 B73xMo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.7 96.5 GSM205422 Mo17xB73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.60 0 1009 Zm.2302.1.A1_at CF626423 hypothetical protein LOC100193695 - 2e-66 At3g58610 ketol-acid reductoisomerase C.G. S.X.
0.01 8e-3 42 Zm.13547.1.A1_at CF623490 Hypothetical protein LOC100193333 - 1e-5 At4g22360 SWIB complex BAF60b domain-containing protein C.G. S.X.
0.01 1e-1 38 Zm.5875.1.A1_at CA402986 hypothetical protein LOC100193662 - 7e+0 At3g15640 cytochrome c oxidase family protein C.G. S.X.
0.01 1e-1 38 Zm.494.1.A1_a_at AF236368.1 prohibitin1 - 2e-48 At4g28510 ATPHB1 (PROHIBITIN 1) C.G. S.X.
0.01 1e-1 38 Zm.494.1.A2_at AF236368.1 prohibitin1 - 2e-48 At4g28510 ATPHB1 (PROHIBITIN 1) C.G. S.X.
0.01 5e-1 36 Zm.6748.1.A1_at BM351187 Ribosomal protein L26 - 1e-4 At3g49910 60S ribosomal protein L26 (RPL26A) C.G. S.X.
0.01 5e-1 36 Zm.6748.1.A1_a_at BM351187 60S ribosomal protein L26-1 - 1e-4 At3g49910 60S ribosomal protein L26 (RPL26A) C.G. S.X.
0.01 5e-1 36 Zm.6748.1.A1_x_at BM351187 Ribosomal protein L26 - 1e-4 At3g49910 60S ribosomal protein L26 (RPL26A) C.G. S.X.
0.01 5e-1 36 Zm.3442.1.A1_at AY103732.1 hypothetical protein LOC100273117 - 9e-9 At1g06680 PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.42 1e-86 321 Arabidopsis thaliana At3g58610 825030 ketol-acid reductoisomerase F:coenzyme binding, oxidoreductase activity, binding, ketol-acid reductoisomerase activity, catalytic activity;P:response to cadmium ion, branched chain family amino acid biosynthetic process;C:in 6 components;BOFAP - - - C.G. S.X.
0.30 9e-27 123 Glycine max Gma.5674.1.S1_a_at CA937173 - - 4e-36 At3g58610 ketol-acid reductoisomerase C.G. S.X.
0.69 0 1679 Hordeum vulgare Contig1643_s_at Contig1643 - - 2e-76 At3g58610 ketol-acid reductoisomerase C.G. S.X.
0.67 0 1598 Oryza sativa Os05g0573700 AK065295.1 - Ketol-acid reductoisomerase, chloroplast precursor(EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase)(Alpha-keto-beta-hydroxylacil reductoisomerase) 2e-100 At3g58610 ketol-acid reductoisomerase C.G. S.X.
0.34 2e-30 135 Populus trichocarpa Ptp.4367.1.S1_s_at CV274546 hypothetical protein - 6e-119 At3g58610 ketol-acid reductoisomerase C.G. S.X.
0.60 0 973 Triticum aestivum Ta.27542.1.S1_at CA605463 - - 4e-74 At3g58610 ketol-acid reductoisomerase C.G. S.X.
0.19 2e-21 103 Vitis vinifera 1622547_at CF201768.1 - - 1e-41 At3g58610 ketol-acid reductoisomerase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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