Gene omics information

Query gene ID Zm.1975.1.S1_at
Gene name pectinesterase-1
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5775.1Zm.1975.1.S1_atBF729513pectinesterase-1-7e-3At3g05610pectinesterase family proteinS.X.H.G.
0.2928.1Zm.9881.1.A1_atBM347704hypothetical protein LOC100273660-3e-1At4g17245zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.1912.8Zm.783.1.S1_atAY105282.1--1e-1At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)S.X.H.G.
0.072.9Zm.7707.1.S1_a_atCK985938Hypothetical protein LOC100193555-1e-2At4g37210tetratricopeptide repeat (TPR)-containing proteinS.X.H.G.
0.051.9Zm.6479.1.A1_atBM080358--8e-18At5g22750RAD5S.X.H.G.
0.031.1Zm.2132.1.S1_atBM381800hypothetical protein LOC100274542-6e-1At5g03790HB51S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
37.399.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
33.899.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.499.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.499.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.999.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.599.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.499.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.399.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.398.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.197.7GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.096e-2097Zm.3885.1.S1_atCK145224Pectin methylesterase1-6e-2At3g06830pectinesterase family proteinC.G.S.X.
0.089e-1683Zm.12262.1.S1_atCA826732--5e-2At3g06830pectinesterase family proteinC.G.S.X.
0.109e-1373Zm.14962.1.A1_atBM268018hypothetical protein LOC100280285-2e-1At3g59010pectinesterase family proteinC.G.S.X.
0.141e-1169Zm.12657.1.A1_atCA826570--1e-1At1g11580PMEPCRA (METHYLESTERASE PCR A)C.G.S.X.
0.318e-1063Zm.10516.1.S1_atCF009232--5e+0At5g03840TFL1 (TERMINAL FLOWER 1)C.G.S.X.
0.023e-342Zm.3806.1.S1_atCF009077hypothetical protein LOC100280019-4e-2At3g17060pectinesterase family proteinC.G.S.X.
0.035e-238Zm.9933.1.A1_atBM349388--2e-5At2g19160unknown proteinC.G.S.X.
0.035e-238Zm.7152.1.A1_atAY110483.1hypothetical protein LOC100216962-7e-5At5g47500pectinesterase family proteinC.G.S.X.
0.025e-238Zm.1147.1.S1_atBM078877hypothetical protein LOC100274188-2e+0At4g27540PRA1.H (PRENYLATED RAB ACCEPTOR 1.H)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-342Arabidopsis thalianaAt3g05610819727pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;OBPFMVA---C.G.S.X.
0.022e-138Glycine maxGmaAffx.69027.1.S1_atBM271256--3e-1At4g22217-C.G.S.X.
0.048e-134Hordeum vulgareHV05M17u_s_atHV05M17u--8e+0At5g26717-C.G.S.X.
0.263e-34147Oryza sativaOs03g0300500AK070513.1-Pectinesterase (EC 3.1.1.11) (Fragment)1e+0At3g49580LSU1 (RESPONSE TO LOW SULFUR 1)C.G.S.X.
0.056e-446Populus trichocarpaPtpAffx.216013.1.S1_atpmrna30544hypothetical protein-2e-1At5g49180pectinesterase family proteinC.G.S.X.
0.413e-73276Triticum aestivumTa.10297.1.A1_atBJ250042--2e-2At4g21445unknown proteinC.G.S.X.
0.035e-134Vitis vinifera1616522_atCF403905hypothetical protein LOC100262892-2e-8At3g14310ATPME3C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage