CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.1969.1.A1_at

Gene name hypothetical protein LOC100275298

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 69.1 Zm.1969.1.A1_at BM378406 hypothetical protein LOC100275298 - 6e+0 At3g15680 zinc finger (Ran-binding) family protein S.X. H.G.
0.35 38.9 Zm.7036.1.S1_at CF041561 hypothetical protein LOC100278098 - 2e-8 At2g45860 unknown protein S.X. H.G.
0.14 7.7 Zm.15978.1.A1_at AI734470 Hypothetical protein LOC100191203 - 1e+0 At4g27310 zinc finger (B-box type) family protein S.X. H.G.
0.12 5.9 Zm.758.1.S1_at CK827705 dehydrogenase/reductase SDR family member 2 - 4e-5 At4g05530 IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1) S.X. H.G.
0.09 4.0 Zm.7056.5.S1_at AY108536.1 hypothetical protein LOC100272517 - 3e-15 At5g45390 CLPP4 (CLP PROTEASE P4) S.X. H.G.
0.08 3.4 Zm.12166.1.A1_at AY108056.1 phenylalanyl-tRNA synthetase beta chain - 1e-3 At1g72550 tRNA synthetase beta subunit family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.2 99.5 GSM253262 ZM_4d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
22.2 99.4 GSM253263 ZM_4d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
12.1 98.6 GSM253264 ZM_4d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
12.0 98.6 GSM253275 ZM_8d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
11.8 98.6 GSM253276 ZM_8d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
10.8 98.5 GSM253257 ZM_2d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
9.7 98.3 GSM253258 ZM_2d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
9.3 98.2 GSM253265 ZM_4d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
9.3 98.2 GSM253260 ZM_2d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
8.9 98.2 GSM253256 ZM_2d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-3 42 ZmAffx.1099.1.A1_at AW129800 - - 2e+1 At4g32340 - C.G. S.X.
0.03 4e-2 38 Zm.17357.1.S1_at CK370769 - - 5e+0 At1g29195 unknown protein C.G. S.X.
0.02 4e-2 38 Zm.14358.1.A1_at CA402172 hypothetical protein LOC100217181 - 2e-10 At1g72710 CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2) C.G. S.X.
0.01 2e-1 36 Zm.13065.1.A1_at CD437453 sarcosine oxidase - 5e-5 At2g24580 sarcosine oxidase family protein C.G. S.X.
0.03 7e-1 34 Zm.8561.2.A1_a_at BM332166 hypothetical protein LOC100277438 - 4e+0 At4g05070 unknown protein C.G. S.X.
0.01 7e-1 34 Zm.5538.1.A1_at AY108866.1 hypothetical protein LOC100272706 - 2e-1 At2g34070 unknown protein C.G. S.X.
0.01 7e-1 34 Zm.4490.1.S1_at AI714786 aspartic proteinase oryzasin-1 - 1e-6 At1g11910 aspartyl protease family protein C.G. S.X.
0.01 7e-1 34 Zm.1579.1.S1_at AY107917.1 AMP-binding protein - 3e-7 At1g77240 AMP-binding protein, putative C.G. S.X.
0.03 7e-1 34 Zm.14852.1.A1_at AI857162 - - 2e-11 At3g57290 EIF3E (EUKARYOTIC TRANSLATION INITIATION FACTOR 3E) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e+0 32 Arabidopsis thaliana At3g15680 820811 zinc finger (Ran-binding) family protein F:binding, zinc ion binding;P:biological_process unknown;C:intracellular;MPOFB - - - C.G. S.X.
0.03 1e-1 38 Glycine max PsAffx.CL2608Contig1_at PsAffx.CL2608Contig1 - - 1e+0 At5g47550 cysteine protease inhibitor, putative / cystatin, putative C.G. S.X.
0.42 2e-60 232 Hordeum vulgare Contig5410_at Contig5410 - - 1e-1 At3g49570 LSU3 (RESPONSE TO LOW SULFUR 3) C.G. S.X.
0.50 3e-83 309 Oryza sativa Os03g0265900 AK120374.1 - Conserved hypothetical protein 6e+0 At5g11910 esterase/lipase/thioesterase family protein C.G. S.X.
0.04 1e-1 38 Populus trichocarpa PtpAffx.4736.1.A1_s_at CV235991 hypothetical protein - 3e-1 At4g39330 CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) C.G. S.X.
0.74 0 734 Triticum aestivum Ta.20645.1.S1_at CD491508 - - 6e-3 At1g80530 nodulin family protein C.G. S.X.
0.04 2e-3 42 Vitis vinifera 1609824_at CA817274 hypothetical protein LOC100258718 - 5e-1 At1g66130 oxidoreductase N-terminal domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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