Gene omics information

Query gene ID	Zm.19350.1.A1_at
Gene name	yip1 domain family member 6
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.19350.1.A1_at	CO531475	yip1 domain family member 6	-	2e-18	At4g30260	integral membrane Yip1 family protein	S.X.	H.G.	Please select
0.47	59.9	Zm.12997.1.S1_at	CA402647	-	-	2e-21	At3g46740	TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III)	S.X.	H.G.	Please select
0.46	58.4	Zm.17543.1.A1_at	CK371034	-	-	6e+0	At5g25240	-	S.X.	H.G.	Please select
0.40	48.5	Zm.5796.2.S1_at	AY107655.1	-	-	3e-18	At5g66420	-	S.X.	H.G.	Please select
0.36	41.3	Zm.10534.1.A1_x_at	CO049306	receptor protein kinase CLAVATA1	-	2e+0	At2g36890	RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)	S.X.	H.G.	Please select
0.32	33.4	Zm.2016.1.S1_at	AW566149	zinc finger, C3HC4 type family protein	-	2e+0	At5g51195	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.8	96.6	GSM206304	Upper pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.7	96.5	GSM206328	Upper pulvinus 60 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.6	96.4	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.4	96.2	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.3	96.1	GSM206298	Lower pulvinus 60 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.1	95.9	GSM206334	Lower pulvinus 60 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.9	95.7	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.9	95.7	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.5	95.1	GSM206331	Lower pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.5	95.1	GSM206301	Upper pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.63	0	811	Zm.19073.1.S1_at	CF059416	yip1 domain family member 6	-	2e-13	At2g18840	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.03	3e+0	32	ZmAffx.1534.1.S1_at	40794996-126	-	-	9e+0	At5g52730	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.6480.1.S1_s_at	AW231306	hypothetical protein LOC100272627	-	1e-11	At5g64200	ATSC35	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.6480.1.S1_at	AW231306	hypothetical protein LOC100272627	-	1e-11	At5g64200	ATSC35	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.5635.1.A1_at	AY111142.1	hypothetical protein LOC100192009	-	3e-18	At1g03900	ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.4415.1.A1_at	BM080841	hypothetical protein LOC100274900	-	5e-3	At3g50550	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.2507.1.A1_at	AY109282.1	-	-	5e-1	At5g57780	-	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.19059.1.A1_at	CO521551	hypothetical protein LOC100193008	-	4e-1	At1g78170	unknown protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.17860.1.S1_at	CF633746	hypothetical protein LOC100193614	-	3e-28	At5g07440	GDH2 (GLUTAMATE DEHYDROGENASE 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	2e-18	93	Arabidopsis thaliana	At4g30260	829149	integral membrane Yip1 family protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MFPOBV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.25	1e-20	101	Glycine max	Gma.8826.1.S1_at	AW350556	-	-	4e-20	At4g30260	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.51	6e-125	446	Hordeum vulgare	Contig12328_at	Contig12328	-	-	4e-17	At4g30260	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.45	2e-125	450	Oryza sativa	Os01g0867700	AK108852.1	-	Protein of unknown function DUF649 domaincontaining protein	9e-9	At2g18840	integral membrane Yip1 family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.27	3e-15	83	Populus trichocarpa	PtpAffx.4568.6.A1_at	CV264825	hypothetical protein	-	7e-71	At2g18840	integral membrane Yip1 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.38	7e-108	391	Triticum aestivum	Ta.4245.1.S1_at	CA614869	-	-	2e-22	At4g30260	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.27	4e-26	117	Vitis vinifera	1616477_at	CF212148	hypothetical protein LOC100247852	-	2e-11	At2g18840	integral membrane Yip1 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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