CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.19335.1.A1_at

Gene name hypothetical protein LOC100279445

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 75.1 Zm.19335.1.A1_at CO521700 hypothetical protein LOC100279445 - 6e-4 At3g22440 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.67 85.8 Zm.6423.2.A1_at AI691968 hypothetical protein LOC100273356 - 1e+0 At3g23180 - S.X. H.G.
0.55 71.6 Zm.9852.1.A1_at BM381073 syntaxin 121 - 5e-3 At5g63740 zinc finger protein-related S.X. H.G.
0.55 71.6 Zm.19146.1.A1_at CO533664 hypothetical protein LOC100193961 - 5e-1 At3g09050 unknown protein S.X. H.G.
0.43 52.8 Zm.9888.2.A1_a_at BM334632 - - 5e+0 At4g16510 YbaK/prolyl-tRNA synthetase-related S.X. H.G.
0.31 31.6 Zm.12269.2.A1_at AW256119 Hypothetical protein LOC100193070 - 2e-4 At3g14130 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.8 97.9 GSM206287 Left pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.5 97.8 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.1 97.7 GSM202304 B73 immature ear tissue, biological replicate 3 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.6 97.6 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.4 97.5 GSM202298 B73 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.3 97.4 GSM206300 Upper pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.1 97.4 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.0 97.3 GSM206306 Lower pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.9 97.3 GSM202292 B73 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.2 96.9 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.56 4e-179 626 Zm.1222.1.A1_at BM351802 - - 6e-2 At3g22440 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.02 3e-1 36 Zm.6683.1.S1_at AI372385 - - 4e-1 At4g21970 unknown protein C.G. S.X.
0.01 3e-1 36 Zm.4159.1.A1_at CF007216 - - 3e-16 At1g15130 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.01 3e-1 36 Zm.4159.1.S1_at BM268557 - - 3e-16 At1g15130 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.01 3e-1 36 Zm.14328.1.S1_at AY109261.1 - - 1e-11 At3g27560 ATN1 C.G. S.X.
0.01 1e+0 34 Zm.5637.1.A1_at BM079527 hypothetical protein LOC100217032 - 3e+0 At3g50250 unknown protein C.G. S.X.
0.02 1e+0 34 Zm.5679.1.S1_at CD437138 hypothetical protein LOC100216885 - 3e-3 At2g43950 OEP37 C.G. S.X.
0.01 1e+0 34 Zm.19068.1.A1_at CO529225 hypothetical protein LOC100193338 - 1e-15 At3g20800 rcd1-like cell differentiation protein, putative C.G. S.X.
0.01 1e+0 34 Zm.18269.1.S1_at BM428973 - - 4e+0 At2g37240 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 6e-4 46 Arabidopsis thaliana At3g22440 821815 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOB - - - C.G. S.X.
0.02 9e-1 36 Glycine max PsAffx.C45000032_at PsAffx.C45000032 - - 4e-1 At3g43432 unknown protein C.G. S.X.
0.16 6e-24 111 Hordeum vulgare Contig3924_at Contig3924 - - 4e-3 At2g39020 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.33 5e-77 289 Oryza sativa Os07g0173200 AK098899.1 - Conserved hypothetical protein 3e-1 At5g60840 unknown protein C.G. S.X.
0.02 2e-1 38 Populus trichocarpa PtpAffx.223960.1.S1_s_at pmrna42186 hypothetical protein - 3e+0 At2g06255 ELF4-L3 (ELF4-Like 3) C.G. S.X.
0.48 6e-35 149 Triticum aestivum Ta.13119.1.A1_at CD491443 - - 2e+1 At5g09960 unknown protein C.G. S.X.
0.02 5e-2 38 Vitis vinifera 1613281_at CF513460 hypothetical protein LOC100249314 - 4e-33 At3g22440 hydroxyproline-rich glycoprotein family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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