Gene omics information

Query gene ID Zm.19227.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8896.7Zm.19227.1.S1_atCO533358--2e-7At5g02540short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.5571.6Zm.18244.1.S1_atCN844522--3e+0At1g24260SEP3 (SEPALLATA3)S.X.H.G.
0.5267.3Zm.2631.1.S1_atAY107698.1hypothetical protein LOC100191885-5e-5At2g21730CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2)S.X.H.G.
0.5166.4Zm.9542.1.A1_atCF624708hypothetical protein LOC100192045-3e-16At4g16170unknown proteinS.X.H.G.
0.5065.7Zm.8321.1.S1_atCO528265calcium-dependent protein kinase, isoform AK1-3e+0At5g61350protein kinase family proteinS.X.H.G.
0.4861.3Zm.18541.1.S1_atCO528387hypothetical protein ache-3e-3At3g26430GDSL-motif lipase/hydrolase family proteinS.X.H.G.
0.4759.9Zm.17650.1.A1_atCK369077prolyl 4-hydroxylase-6e-4At2g23096oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.4455.7Zm.11551.1.A1_atAY108861.11-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imi dazole-4-carboxamide isomerase-4e-1At4g17960unknown proteinS.X.H.G.
0.4352.8Zm.1240.1.A1_atAI001233hypothetical protein LOC100274890-6e-3At3g29034unknown proteinS.X.H.G.
0.4251.3Zm.3780.3.S1_atCF008471--2e+0At1g29720protein kinase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.298.6GSM375796Deep-sowing 10d treatment GA3, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
11.698.6GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
11.298.5GSM385707Deep-sowing 10d treatment IAA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
11.298.5GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
11.298.5GSM375797Deep-sowing 10d treatment UCZ, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
11.198.5GSM375791Deep-sowing 10d treatment GA3, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
10.998.5GSM385708Deep-sowing 10d treatment IAA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
10.898.5GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
10.098.4GSM375794Deep-sowing 10d treatment UCZ, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
9.998.3GSM375795Deep-sowing 10d treatment Control, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e-238Zm.15385.1.A1_atBM378219VAMP protein SEC22-5e-4At3g52470harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinC.G.S.X.
0.023e-136Zm.17808.1.S1_atCK371597protein Kinase-like protein TMKL1-4e-1At3g55880unknown proteinC.G.S.X.
0.021e+034Zm.6750.1.S1_atBM333179hypothetical protein LOC100217007-2e-4At4g11410short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.011e+034Zm.6107.1.A1_atAY488135.1allene oxide synthase-4e+0At5g52480-C.G.S.X.
0.011e+034Zm.5127.1.A1_atCF637442--9e-10At3g52640nicastrin-relatedC.G.S.X.
0.011e+034Zm.4140.1.S1_atBE552528hypothetical protein LOC100191980-2e-17At1g69790protein kinase, putativeC.G.S.X.
0.011e+034Zm.14907.1.A1_atBM267241hypothetical protein LOC100279699-2e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
0.011e+034Zm.14573.1.S1_atCO527252glucan endo-1,3-beta-glucosidase 7-9e-1At3g46570glycosyl hydrolase family 17 proteinC.G.S.X.
0.011e+034Zm.1058.2.A1_atBM079078--3e-11At4g269102-oxoacid dehydrogenase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-757Arabidopsis thalianaAt5g02540831913short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA---C.G.S.X.
0.076e-240Glycine maxGmaAffx.45674.1.S1_atAW704884--4e-3At2g37540short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.520636Hordeum vulgareContig4531_atContig4531--1e-5At2g37540short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.560646Oryza sativaOs01g0151700AK099949.1-Short-chain dehydrogenase Tic325e-2At2g37540short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.027e-550Populus trichocarpaPtpAffx.212727.1.S1_atpmrna24896hypothetical protein-1e+0At3g07630ADT2 (arogenate dehydratase 2)C.G.S.X.
0.570664Triticum aestivumTa.4018.1.S1_atCD888469--7e-4At2g37540short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.033e-342Vitis vinifera1608387_atCB975768--1e-1At5g02540short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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