Gene omics information

Query gene ID Zm.19212.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7792.1Zm.19212.1.S1_atBE238501--1e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)S.X.H.G.
0.7389.9Zm.18946.1.A1_atBM338625hypothetical protein LOC100278262-1e+0At1g69660meprin and TRAF homology domain-containing protein / MATH domain-containing proteinS.X.H.G.
0.6077.8Zm.17192.1.A1_atBM339467--5e+0At2g22520unknown proteinS.X.H.G.
0.5674.4Zm.4420.1.S1_atCF628272hypothetical protein LOC100273293-4e-15At3g13450DIN4 (DARK INDUCIBLE 4)S.X.H.G.
0.5571.6Zm.9975.1.A1_atBM074697--7e-6At5g64200ATSC35S.X.H.G.
0.4759.9Zm.4164.1.A1_x_atBM079246--5e+0At3g01860unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.299.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.699.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.599.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.099.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.399.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.099.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.199.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.699.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.199.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001927Zm.19212.1.A1_atAY110394.1--1e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.023e-342Zm.578.1.S1_atAF112150.1MADS box protein 3-3e-3At5g60910AGL8 (agamous-like 8)C.G.S.X.
0.023e-342Zm.4510.1.A1_a_atCF636202hypothetical protein LOC100277304-6e-1At5g24879unknown proteinC.G.S.X.
0.021e-240Zm.4905.1.S1_atAY106392.1hypothetical protein LOC100272547-1e-14At4g27120unknown proteinC.G.S.X.
0.031e-240Zm.18594.1.A1_atCO519739prMC3-1e+0At5g04760myb family transcription factorC.G.S.X.
0.015e-238Zm.9021.1.S1_atCO533021hypothetical protein LOC100192978-8e-4At5g22920zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.025e-238Zm.18508.1.S1_atCO521114uclacyanin-2-5e-1At1g25300octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinC.G.S.X.
0.012e-136Zm.7145.1.A1_atBE510364hypothetical protein LOC100193598-2e-5At5g07180ERL2 (ERECTA-LIKE 2)C.G.S.X.
0.012e-136Zm.5635.1.A1_atAY111142.1hypothetical protein LOC100192009-3e-18At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138Arabidopsis thalianaAt1g06160837125ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.---C.G.S.X.
0.032e-448Glycine maxGma.319.1.S1_atBI970504--3e-40At5g13480FYC.G.S.X.
0.032e-136Hordeum vulgareContig13345_atContig13345--3e+0At2g27160unknown proteinC.G.S.X.
0.035e-1583Oryza sativaOs01g0951000AK111493.1-The start codon is not identified.3e-57At5g13480FYC.G.S.X.
0.034e-240Populus trichocarpaPtpAffx.86865.1.A1_atDN486981hypothetical protein-2e-2At3g42310unknown proteinC.G.S.X.
0.048e-342Triticum aestivumTa.9365.2.S1_atBJ301402--6e-1At3g46030HTB11C.G.S.X.
0.031e-136Vitis vinifera1610009_atCF205831.1--2e-11At1g31812ACBP6 (acyl-CoA-binding protein 6)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage