Gene omics information

Query gene ID	Zm.19204.1.S1_at
Gene name	protein phosphatase 2C-like
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.19204.1.S1_at	CA404362	protein phosphatase 2C-like	-	1e-3	At1g09160	protein phosphatase 2C-related / PP2C-related	S.X.	H.G.	Please select
0.91	99.0	Zm.19203.1.S1_at	CO520849	hypothetical protein LOC100193957	-	1e-5	At3g07220	transcriptional activator, putative	S.X.	H.G.	Please select
0.91	99.0	Zm.3450.1.A1_at	AW066723	hypothetical protein LOC100191605	-	4e+0	At2g38695	unknown protein	S.X.	H.G.	Please select
0.80	94.0	Zm.6692.1.S1_at	CA409229	hypothetical protein LOC100193785	-	3e-24	At3g24530	AAA-type ATPase family protein / ankyrin repeat family protein	S.X.	H.G.	Please select
0.67	85.8	Zm.7332.1.S1_at	CF013037	kinesin-like protein9	-	2e-24	At3g16630	KINESIN-13A	S.X.	H.G.	Please select
0.53	69.1	Zm.7334.1.S1_at	CD975420	kinesin-like protein16	-	2e-25	At5g41310	kinesin motor protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.7	97.9	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.5	97.5	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.9	96.7	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.3	96.1	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.8	95.5	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.8	95.5	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.8	95.5	GSM205370	B73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.7	95.4	GSM206302	Upper pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.5	95.1	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.4	94.9	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	3e-14	79	Zm.3015.1.S2_at	AW066558	hypothetical protein LOC100272395	-	2e-154	At1g54270	EIF4A-2	C.G.	S.X.	Please select
0.10	3e-14	79	Zm.3015.1.S1_a_at	U73459.1	translational initiation factor eIF-4A	-	2e-154	At1g54270	EIF4A-2	C.G.	S.X.	Please select
0.01	1e-1	38	Zm.3400.1.S1_at	CN845120	-	-	2e-9	At5g17170	ENH1 (enhancer of sos3-1)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.5677.1.A1_at	CF057393	-	-	6e-4	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.12115.1.A1_at	BM379412	hypothetical protein LOC100192518	-	6e-1	At5g12910	histone H3, putative	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.3454.1.S1_at	AW282335	sex determination protein tasselseed-2	-	3e+0	At2g27130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.16977.1.S1_at	AB102956.1	histidine kinase 2	-	4e-20	At1g27320	AHK3 (ARABIDOPSIS HISTIDINE KINASE 3)	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.12718.2.S1_a_at	AY106773.1	SET domain protein 113	-	6e+0	At5g53742	-	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.12718.2.A1_at	AY106773.1	SET domain protein 113	-	6e+0	At5g53742	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	1e-3	46	Arabidopsis thaliana	At1g09160	837436	protein phosphatase 2C-related / PP2C-related	F:protein serine/threonine phosphatase activity, catalytic activity;P:unknown;C:plasma membrane;PMOFBVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	4e-4	48	Glycine max	Gma.15241.1.S1_at	BG352924	-	-	7e-19	At1g09160	protein phosphatase 2C-related / PP2C-related	C.G.	S.X.	Please select
0.42	2e-74	280	Hordeum vulgare	Contig10038_at	Contig10038	-	-	3e-15	At1g68410	protein phosphatase 2C-related / PP2C-related	C.G.	S.X.	Please select
0.58	0	1059	Oryza sativa	Os03g0301700	AK101878.1	-	Calmodulin-binding protein phosphatase	4e-3	At1g09160	protein phosphatase 2C-related / PP2C-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	4e-4	48	Populus trichocarpa	Ptp.589.1.S1_at	CV246708	-	-	3e-24	At1g09160	protein phosphatase 2C-related / PP2C-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.48	0	831	Triticum aestivum	TaAffx.73209.1.S1_at	CA604868	-	-	1e-8	At1g09160	protein phosphatase 2C-related / PP2C-related	C.G.	S.X.	Please select
0.02	3e-1	36	Vitis vinifera	1610236_at	CF405009	hypothetical protein LOC100249319	-	1e-10	At1g09160	protein phosphatase 2C-related / PP2C-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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