Gene omics information

Query gene ID Zm.19143.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.19143.1.A1_atCF626055--1e-11At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)S.X.H.G.
0.8395.6Zm.17219.2.S1_a_atAY106749.1adenine phosphoribosyltransferase-1e-5At1g80050APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)S.X.H.G.
0.6785.8Zm.12222.1.A1_atBQ048339--8e-9At1g20580small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeS.X.H.G.
0.6381.1Zm.10551.1.A1_atBQ538249hypothetical protein LOC100194275-1e+1At5g52760heavy-metal-associated domain-containing proteinS.X.H.G.
0.5775.1Zm.2860.2.A1_atAY107982.1hypothetical protein LOC100192742-1e+0At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)S.X.H.G.
0.2928.1Zm.15061.1.S1_atBE050291calmodulin-3e+0At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.899.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
39.799.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
33.499.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.699.1GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.699.0GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.698.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.598.7GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.898.5GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.697.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.297.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.343e-112404Zm.19324.1.A1_atCK986141hypothetical protein LOC100279823-6e-3At3g13065SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)C.G.S.X.
0.126e-46184Zm.12317.1.S1_atAY106969.1ethylene-responsive transcription factor 4-2e-12At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.032e-963Zm.1140.1.S1_atBM073428hypothetical protein LOC100279272-4e-14At3g49670BAM2 (BARELY ANY MERISTEM 2)C.G.S.X.
0.049e-857Zm.9130.1.A1_atBM268570--7e-2At3g62220serine/threonine protein kinase, putativeC.G.S.X.
0.029e-857Zm.5300.1.A1_atAI734564--5e-9At5g01020protein kinase family proteinC.G.S.X.
0.034e-756Zm.8505.1.A1_atAY107567.1--1e-4At1g51870protein kinase family proteinC.G.S.X.
0.031e-654Zm.8626.1.A1_atBM348921hypothetical protein LOC100274398-1e+0At5g61600ethylene-responsive element-binding family proteinC.G.S.X.
0.031e-654Zm.4702.1.A1_atCA401021--9e-3At4g36180leucine-rich repeat family proteinC.G.S.X.
0.046e-652ZmAffx.812.1.A1_atAI770420--8e-4At1g49730protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e-1171Arabidopsis thalianaAt3g15210820752ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.---C.G.S.X.
0.112e-26121Glycine maxGma.4463.1.S1_atCD390833--3e-24At1g53170ERF8C.G.S.X.
0.122e-46186Hordeum vulgareContig6636_atContig6636--4e-11At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.151e-31139Oryza sativaOs02g0648100AK111267.1-Protein kinase domain containing protein1e-2At3g13065SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)C.G.S.X.
0.047e-240Populus trichocarpaPtp.3705.1.A1_s_atCV247356AP2/ERF domain-containing transcription factor-8e-3At1g28360ERF12 (ERF DOMAIN PROTEIN 12)C.G.S.X.
0.115e-27123Triticum aestivumTa.14000.1.S1_atBQ789086ethylene-responsive factor-like transcription factor ERFL1a-1e-5At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.113e-22105Vitis vinifera1616198_atCF405950hypothetical protein LOC100242144-1e-7At1g28370ERF11 (ERF DOMAIN PROTEIN 11)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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