Gene omics information

Query gene ID Zm.19112.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8Zm.19112.1.A1_atCO517957--3e-4At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)S.X.H.G.
0.5571.6Zm.3748.1.S1_atCF624336--4e-23At5g11110ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F)S.X.H.G.
0.5065.7Zm.12552.1.A1_atCF628910hypothetical protein LOC100275462 /// hypothetical protein LOC100278677-4e+0At5g24770VSP2 (VEGETATIVE STORAGE PROTEIN 2)S.X.H.G.
0.4455.7Zm.8654.1.A1_atBM334074hypothetical protein LOC100280034-3e-2At2g30490C4H (CINNAMATE-4-HYDROXYLASE)S.X.H.G.
0.4352.8Zm.2849.2.A1_atCF057194hypothetical protein LOC100193185-3e-24At1g06390GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1)S.X.H.G.
0.2115.5Zm.9580.1.A1_atBM332976hypothetical protein LOC100277774-6e+0At5g24155squalene monooxygenase, putative / squalene epoxidase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.399.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.199.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.199.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.699.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.898.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.798.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.098.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.898.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.898.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.398.2GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-238Zm.18547.1.A1_atCO522407hypothetical protein LOC100273592-1e+1At5g65060MAF3 (MADS AFFECTING FLOWERING 3)C.G.S.X.
0.034e-238Zm.10131.1.A1_atBG873885hypothetical protein LOC100273383-3e-1At5g63230-C.G.S.X.
0.011e-136Zm.10124.1.A1_atAY107109.1heat shock protein 83-6e-15At3g07770ATP bindingC.G.S.X.
0.036e-134Zm.5704.1.A1_atAI637031--1e+1At5g46795MSP2 (microspore-specific promoter 2)C.G.S.X.
0.026e-134Zm.5663.1.A1_atCA399708hypothetical protein LOC100193372-4e-4At5g27730unknown proteinC.G.S.X.
0.026e-134Zm.13049.1.S1_atCA403829hypothetical protein LOC100277346-8e+0At5g20165unknown proteinC.G.S.X.
0.022e+032Zm.7387.1.A1_atBM078157--2e+1At5g18403-C.G.S.X.
0.012e+032Zm.7134.1.S1_atCF634276hypothetical protein LOC100272801 /// trans-cinnamate 4-monooxygenase-1e-18At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
0.022e+032Zm.17264.1.A1_atCF002595--3e-2At5g10600CYP81K2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-446Arabidopsis thalianaAt2g40890818686CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.---C.G.S.X.
0.037e+032Glycine maxPsAffx.psMC006xJ19f_atPsAffx.psMC006xJ19f--1e+1At5g07600oleosin / glycine-rich proteinC.G.S.X.
0.151e-240Hordeum vulgareContig20828_atContig20828--3e-1At4g15360CYP705A3C.G.S.X.
0.073e-344Oryza sativaOs10g0166600AK108519.1-Cytochrome P450 family protein2e-1At1g33730CYP76C5C.G.S.X.
0.057e-342Populus trichocarpaPtp.4863.2.A1_atCV255138--3e-1At1g33720CYP76C6C.G.S.X.
0.112e-240Triticum aestivumTaAffx.1119.1.A1_atCK212688--1e+0At3g52525OFP6 (OVATE FAMILY PROTEIN 6)C.G.S.X.
0.032e+032Vitis vinifera1618960_atCF404640hypothetical protein LOC100251117-3e+0At3g58310receptor-like protein kinase-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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