CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.19094.1.S1_at

Gene name hypothetical protein LOC100279575

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.19094.1.S1_at CO522607 hypothetical protein LOC100279575 - 2e-4 At1g14540 anionic peroxidase, putative S.X. H.G.
0.57 75.1 Zm.12713.1.S1_at BI478939 - - 1e-24 At3g19170 ATPREP1 (PRESEQUENCE PROTEASE 1) S.X. H.G.
0.44 55.7 Zm.13794.1.S1_at AY104961.1 - - 7e-1 At5g53280 PDV1 (PLASTID DIVISION1) S.X. H.G.
0.40 48.5 Zm.2031.1.A1_at AY103664.1 csu1120 protein - 5e-4 At3g50550 unknown protein S.X. H.G.
0.33 36.0 Zm.4034.1.A1_at CF972567 - - 3e-7 At1g55680 WD-40 repeat family protein S.X. H.G.
0.29 28.1 Zm.1377.1.A1_at BG873710 hypothetical protein LOC100275345 - 2e+0 At2g46460 nucleic acid binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.9 98.3 GSM323172 Zm_SG200Dpep1_24hpi_III GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
9.7 98.3 GSM323170 Zm_SG200Dpep1_24hpi_I GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
9.1 98.2 GSM253244 ZM_12h_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
8.1 98.0 GSM375796 Deep-sowing 10d treatment GA3, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
8.0 98.0 GSM253246 ZM_12h_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
7.2 97.8 GSM253245 ZM_12h_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
6.8 97.6 GSM385710 Deep-sowing 10d treatment TIBA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
6.6 97.6 GSM385708 Deep-sowing 10d treatment IAA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
6.5 97.5 GSM253249 ZM_12h_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
6.3 97.4 GSM385707 Deep-sowing 10d treatment IAA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 1e-13 77 Zm.3095.1.S1_at CO524214 hypothetical protein LOC100192080 - 4e-2 At5g17820 peroxidase 57 (PER57) (P57) (PRXR10) C.G. S.X.
0.07 4e-13 75 Zm.5808.1.A1_at BM078229 peroxidase 39 - 7e-1 At5g58400 peroxidase, putative C.G. S.X.
0.05 3e-11 69 Zm.16643.1.S1_at CK144844 peroxidase 27 - 3e-3 At1g44970 peroxidase, putative C.G. S.X.
0.05 6e-9 61 Zm.2136.1.S1_at AW282383 hypothetical protein LOC100192761 - 5e-5 At1g44970 peroxidase, putative C.G. S.X.
0.06 6e-9 61 Zm.18111.1.S1_at CF632606 peroxidase 17 - 8e-4 At2g22420 peroxidase 17 (PER17) (P17) C.G. S.X.
0.05 2e-8 59 Zm.5170.1.S1_at CF349172 hypothetical protein LOC100216995 - 1e-5 At1g44970 peroxidase, putative C.G. S.X.
0.03 4e-7 56 Zm.3932.1.S1_at BG842197 hypothetical protein LOC100191217 - 3e+0 At4g11290 peroxidase, putative C.G. S.X.
0.02 4e-7 56 Zm.2766.1.A1_at CD998947 peroxidase - 4e-2 At3g21770 peroxidase 30 (PER30) (P30) (PRXR9) C.G. S.X.
0.04 4e-7 56 Zm.1616.1.A1_at BM380022 plasma membrane-bound peroxidase 3-1 - 6e-2 At1g14540 anionic peroxidase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-4 48 Arabidopsis thaliana At1g14540 838016 anionic peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM - - - C.G. S.X.
0.02 7e-2 40 Glycine max GmaAffx.15753.2.S1_at CA782963 - - 8e-20 At3g52950 CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein C.G. S.X.
0.16 3e-39 163 Hordeum vulgare HVSMEb0011O12r2_at HVSMEb0011O12r2 - - 4e+0 At2g32020 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.56 8e-163 575 Oryza sativa Os11g0210100 AU096632 - Peroxidase 43 precursor (EC 1.11.1.7) (AtperoxP43) 2e+0 At1g66690 S-adenosyl-L-methionine:carboxyl methyltransferase family protein C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.20027.1.S1_at CK104223 - - 6e-6 At1g73000 - C.G. S.X.
0.41 5e-101 369 Triticum aestivum TaAffx.114394.1.S1_at CA593883 - - 3e-2 At1g14540 anionic peroxidase, putative C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1610892_at CF517145 hypothetical protein LOC100242885 - 2e-1 At2g22420 peroxidase 17 (PER17) (P17) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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