Gene omics information

Query gene ID	Zm.19061.1.A1_at
Gene name	hypothetical protein LOC100193436
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	55.7	Zm.19061.1.A1_at	CO532046	hypothetical protein LOC100193436	-	5e+0	At3g62370	unknown protein	S.X.	H.G.	Please select
0.57	75.1	Zm.15432.1.S1_at	CA401222	-	-	9e+0	At5g02080	DNA/panthothenate metabolism flavoprotein family protein	S.X.	H.G.	Please select
0.50	65.7	Zm.33.1.S1_s_at	M12144.1	alpha zein 19kDa D1 /// alpha zein 19kDa D2 /// hypothetical protein LOC100101516 /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1A alpha zein protein	-	7e-1	At1g18265	unknown protein	S.X.	H.G.	Please select
0.44	55.7	Zm.3952.1.S1_at	AW155692	-	-	1e-4	At2g19950	GC1 (Golgin Candidate 1)	S.X.	H.G.	Please select
0.31	31.6	Zm.17102.1.A1_at	CD527578	Histone H3.2	-	4e-29	At1g09200	histone H3	S.X.	H.G.	Please select
0.28	28.1	Zm.5323.1.A1_at	CK827563	hypothetical protein LOC100194352	-	2e+0	At4g13968	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.7	99.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.8	99.0	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
14.8	98.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
13.6	98.8	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
12.7	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.8	96.6	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.41	1e-146	517	Zm.4432.1.A1_at	CF626711	hypothetical protein LOC100274260	-	4e+0	At2g20570	GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1)	C.G.	S.X.	Please select
0.30	7e-16	83	Zm.18327.1.A1_at	AW060107	-	-	4e+0	At4g26160	ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.11824.1.A1_at	AY313903.1	yabby9 protein	-	4e-12	At4g00180	YAB3 (YABBY3)	C.G.	S.X.	Please select
0.03	6e-1	34	ZmAffx.1282.1.S1_at	40794996-130	-	-	3e+0	At3g11780	MD-2-related lipid recognition domain-containing protein / ML domain-containing protein	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.8293.1.S1_at	CF626174	harpin-induced protein	-	7e-1	At1g74560	NRP1 (NAP1-RELATED PROTEIN 1)	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.7138.1.S1_at	AY106584.1	hypothetical protein LOC100274743	-	4e-1	At3g16851	unknown protein	C.G.	S.X.	Please select
0.01	6e-1	34	Zm.681.1.A1_at	AY029313.1	barley mlo defense gene homolog2	-	4e-6	At2g17480	MLO8 (MILDEW RESISTANCE LOCUS O 8)	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.5882.1.A1_at	AI637237	-	-	2e-1	At1g52880	NAM (NO APICAL MERISTEM)	C.G.	S.X.	Please select
0.01	6e-1	34	Zm.1028.1.S1_at	BM380738	hypothetical protein LOC100274540	-	1e-15	At3g21690	MATE efflux family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e+0	32	Arabidopsis thaliana	At3g62370	825410	unknown protein	F:unknown;P:unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-1	36	Glycine max	GmaAffx.30358.1.S1_at	AW596318	-	-	5e-2	At5g47170	unknown protein	C.G.	S.X.	Please select
0.33	3e-24	111	Hordeum vulgare	Contig14748_at	Contig14748	-	-	5e+0	At4g02482	chloroplast outer envelope GTP-binding protein, putative	C.G.	S.X.	Please select
0.19	1e-54	214	Oryza sativa	Os03g0119300	AK069220.1	-	Proteinase inhibitor I9, subtilisin propeptidedomain containing protein	3e-1	At4g00230	XSP1 (xylem serine peptidase 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	5e-1	36	Populus trichocarpa	PtpAffx.200114.1.S1_at	pmrna210	hypothetical protein	-	2e-1	At1g28040	protein binding / zinc ion binding	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	2e-11	69	Triticum aestivum	Ta.10200.1.A1_a_at	CK205234	-	-	5e+0	At4g02482	chloroplast outer envelope GTP-binding protein, putative	C.G.	S.X.	Please select
0.03	6e+0	30	Vitis vinifera	1620616_at	CA808066	-	-	1e+0	At5g09230	SRT2 (SIRTUIN 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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