Gene omics information

Query gene ID	Zm.19037.1.S1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.1	Zm.19037.1.S1_at	CA404446	-	-	1e-30	At3g50530	CRK (CDPK-related kinase)	S.X.	H.G.	Please select
0.80	94.0	Zm.12546.2.A1_at	AI770557	-	-	3e+0	At5g56150	UBC30 (ubiquitin-conjugating enzyme 30)	S.X.	H.G.	Please select
0.57	75.1	Zm.5289.2.A1_a_at	AI600945	hypothetical protein LOC100274172	-	1e-30	At2g33040	ATP synthase gamma chain, mitochondrial (ATPC)	S.X.	H.G.	Please select
0.31	31.6	Zm.17510.1.A1_at	CK144409	hypothetical protein LOC100217109	-	6e-22	At1g08970	NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)	S.X.	H.G.	Please select
0.29	28.1	Zm.186.1.S1_at	X71396.1	Bowman-Birk type wound-induced proteinase inhibitor WIP1	-	1e+0	At1g20000	TAF11b (TBP-ASSOCIATED FACTOR 11b)	S.X.	H.G.	Please select
0.07	2.9	Zm.2780.1.A1_at	CF057723	hypothetical protein LOC100278371	-	4e-1	At1g14270	CAAX amino terminal protease family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
32.9	99.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.4	99.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.8	99.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM320461	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0	94.0	GSM206297	Lower pulvinus 30 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.0	94.0	GSM320459	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.73	0	938	Zm.14134.1.A1_at	CK985750	CDPK-related protein kinase	-	1e-18	At3g50530	CRK (CDPK-related kinase)	C.G.	S.X.	Please select
0.05	2e-15	83	Zm.41.1.S1_at	AI600908	calcium dependent protein kinase1	-	1e-16	At2g46700	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select
0.04	3e-5	50	Zm.42.1.S1_at	D84508.1	CDPK-related protein kinase	-	9e-17	At2g46700	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select
0.01	2e-3	44	Zm.221.1.A1_at	U28376.1	calcium-dependent protein kinase	-	4e-25	At3g20410	CPK9 (calmodulin-domain protein kinase 9)	C.G.	S.X.	Please select
0.01	6e-3	42	Zm.15857.1.A1_at	D85039.1	calcium-dependent protein kinase	-	2e-36	At1g50700	CPK33	C.G.	S.X.	Please select
0.01	2e-2	40	Zm.5643.1.A1_at	AY425817.1	mitogen activated protein kinase 6	-	6e-55	At5g19010	MPK16	C.G.	S.X.	Please select
0.03	9e-2	38	Zm.6306.1.A1_a_at	AY301062.2	calcium-dependent protein kinase ZmCPK11	-	9e-17	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.03	9e-2	38	Zm.6306.1.A1_at	AY301062.2	calcium-dependent protein kinase ZmCPK11	-	9e-17	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.01	9e-2	38	Zm.19155.1.S1_at	CA401905	calcium-dependent protein kinase, isoform 2	-	9e-29	At4g23650	CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	1e-30	135	Arabidopsis thaliana	At3g50530	824217	CRK (CDPK-related kinase)	CDPK-related kinase	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.21	3e-29	131	Glycine max	GmaAffx.85393.1.S1_at	BI893810	-	-	2e-29	At3g56760	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select
0.23	2e-70	266	Hordeum vulgare	rbags12c10_at	rbags12c10	-	-	2e-2	At3g50530	CRK (CDPK-related kinase)	C.G.	S.X.	Please select
0.54	6e-133	476	Oryza sativa	Os07g0619800	AK121343.1	-	CDPK-related protein kinase (EC 2.7.1.-) (PK421)	8e-48	At3g50530	CRK (CDPK-related kinase)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.12	8e-5	50	Populus trichocarpa	PtpAffx.92888.1.S1_s_at	AI166960	hypothetical protein	-	7e-42	At3g50530	CRK (CDPK-related kinase)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e-10	67	Triticum aestivum	Ta.17648.1.S1_at	CA623067	-	-	4e-20	At2g46700	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select
0.04	1e-3	44	Vitis vinifera	1610570_at	CA807939	hypothetical protein LOC100246879	-	2e-24	At5g24430	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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