Gene omics information

Query gene ID	Zm.19028.1.S1_at
Gene name	hypothetical protein LOC100192863
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.19028.1.S1_at	T18786	hypothetical protein LOC100192863	-	4e-2	At4g19270	unknown protein	S.X.	H.G.	Please select
0.77	92.1	Zm.652.1.S1_at	AY029559.1	methyl binding domain	-	2e-1	At5g17870	PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)	S.X.	H.G.	Please select
0.67	85.8	ZmAffx.1521.1.S1_at	11990232-58	-	-	1e-70	Atcg00790	-	S.X.	H.G.	Please select
0.63	81.1	Zm.6364.1.S1_at	T20372	-	-	8e-1	At2g22060	-	S.X.	H.G.	Please select
0.40	48.5	Zm.9088.1.A1_at	CB350848	-	-	1e+0	At2g06908	unknown protein	S.X.	H.G.	Please select
0.15	8.6	ZmAffx.944.1.S1_at	AI820414	-	-	2e-10	At3g57150	NAP57 (Arabidopsis thaliana homologue of NAP57)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.3	96.1	GSM202320	B73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.3	96.1	GSM202310	B73 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.3	96.1	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.9	95.7	GSM202315	B73 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.6	95.2	GSM205366	B73 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.5	95.1	GSM202313	B73xMo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.4	94.9	GSM202318	B73xMo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.4	94.9	GSM202324	Mo17xB73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.4	94.9	GSM205370	B73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2	94.5	GSM202316	Mo17xB73 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	2496	Zm.19028.1.A1_at	H35880	Hypothetical protein LOC100192863	-	4e-2	At4g19270	unknown protein	C.G.	S.X.	Please select
0.02	7e-2	38	Zm.18037.1.S1_at	AY105716.1	Hypothetical protein LOC100193453	-	1e+0	At2g15680	calmodulin-related protein, putative	C.G.	S.X.	Please select
0.02	7e-2	38	Zm.18037.1.A1_at	AY105716.1	Hypothetical protein LOC100193453	-	1e+0	At2g15680	calmodulin-related protein, putative	C.G.	S.X.	Please select
0.02	7e-2	38	Zm.11713.1.A1_at	CF624210	hypothetical protein LOC100193841	-	9e-2	At4g19270	unknown protein	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.7103.1.S1_at	BM335919	-	-	6e-57	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.6509.1.S1_at	CO528105	hypothetical protein LOC100193730	-	5e-11	At1g74640	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.6231.1.A1_x_at	AY104594.1	60S ribosomal protein L10-3	-	6e+0	At3g46040	RPS15AD (ribosomal protein S15A D)	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.6147.2.S1_at	CD942228	-	-	4e-24	At3g51800	ATG2	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.3558.1.A1_at	CA402352	-	-	3e+0	At1g68620	hydrolase	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e-2	40	Arabidopsis thaliana	At4g19270	827667	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	9e-1	36	Glycine max	PsAffx.psMA008xD21f_s_at	PsAffx.psMA008xD21f	-	-	8e-1	At4g38960	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.55	7e-101	367	Hordeum vulgare	Contig6372_at	Contig6372	-	-	3e-2	At5g02050	mitochondrial glycoprotein family protein / MAM33 family protein	C.G.	S.X.	Please select
0.50	2e-116	420	Oryza sativa	Os08g0542100	AK058490.1	-	Ribosomal protein L30 family protein	5e-1	At5g10040	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-1	38	Populus trichocarpa	PtpAffx.16316.2.S1_at	CV230825	-	-	4e-1	At1g16020	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.40	2e-87	323	Triticum aestivum	Ta.10501.2.S1_x_at	BQ169743	-	-	1e+1	At4g16750	DRE-binding transcription factor, putative	C.G.	S.X.	Please select
0.02	3e+0	32	Vitis vinifera	1619018_at	CF414864	hypothetical protein LOC100254250	-	6e-2	At5g54850	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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