Gene omics information

Query gene ID	Zm.18885.1.A1_at
Gene name	hypothetical protein LOC100276818
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.58	75.1	Zm.18885.1.A1_at	CO530040	hypothetical protein LOC100276818	-	3e+0	At5g28780	unknown protein	S.X.	H.G.	Please select
0.67	85.8	Zm.13679.1.A1_at	AW424469	chemocyanin	-	9e-5	At1g72230	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.67	85.8	ZmAffx.936.1.S1_at	AI677620	-	-	3e+0	At3g10490	anac052 (Arabidopsis NAC domain containing protein 52)	S.X.	H.G.	Please select
0.64	81.7	Zm.14476.2.A1_at	AY109949.1	Protein disulfide isomerase	-	1e-5	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	S.X.	H.G.	Please select
0.63	81.1	Zm.4553.1.S1_at	BE238641	-	-	4e-1	At4g28860	ckl4 (Casein Kinase I-like 4)	S.X.	H.G.	Please select
0.63	81.1	Zm.17521.1.S1_at	CK370540	complex 1 protein containing protein	-	2e+0	At4g39340	unknown protein	S.X.	H.G.	Please select
0.57	75.1	Zm.10112.1.A1_at	BM268000	-	-	1e+0	At5g23810	AAP7	S.X.	H.G.	Please select
0.48	61.3	Zm.5313.2.A1_at	CA398418	60S ribosomal protein L12	-	9e-9	At2g37190	60S ribosomal protein L12 (RPL12A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.6	98.7	GSM205434	Mo17xB73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
10.2	98.4	GSM205424	Mo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
9.9	98.3	GSM205431	Mo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
8.6	98.1	GSM205375	Mo17xB73 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
8.2	98.0	GSM205427	Mo17xB73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
8.1	98.0	GSM205422	Mo17xB73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
7.8	97.9	GSM205436	B73xMo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
7.7	97.9	GSM205420	Mo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
7.1	97.7	GSM205425	B73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
7.1	97.7	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	7e-2	38	Zm.9616.1.A1_at	BM333833	hypothetical protein LOC100276315	-	5e+0	At5g35695	unknown protein	C.G.	S.X.	Please select
0.01	7e-2	38	Zm.697.1.A1_a_at	AB102957.1	histidine kinase 3	-	1e-17	At5g35750	AHK2 (ARABIDOPSIS HISTIDINE KINASE 2)	C.G.	S.X.	Please select
0.01	7e-2	38	Zm.652.1.S1_at	AY029559.1	methyl binding domain	-	2e-1	At5g17870	PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.6066.1.A1_at	CF635836	-	-	2e-1	At1g30690	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.2953.1.S1_at	CF054623	hypothetical protein LOC100276099	-	3e-6	At5g13500	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.14500.1.S1_at	CO525044	hypothetical protein LOC100273126	-	3e-16	At3g14390	diaminopimelate decarboxylase, putative / DAP carboxylase, putative	C.G.	S.X.	Please select
0.02	5e+0	32	ZmAffx.362.1.A1_at	AI670617	-	-	8e-1	At1g56345	pseudouridine synthase family protein	C.G.	S.X.	Please select
0.02	5e+0	32	ZmAffx.362.1.S1_at	AI670617	-	-	8e-1	At1g56345	pseudouridine synthase family protein	C.G.	S.X.	Please select
0.01	5e+0	32	Zm.6577.1.A1_at	AI714833	-	-	3e-13	At5g51480	SKS2 (SKU5 SIMILAR 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e+0	34	Arabidopsis thaliana	At5g28780	832993	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPBMFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	9e-1	36	Glycine max	GmaAffx.89468.1.A1_at	CK606264	-	-	1e-1	At3g26250	DC1 domain-containing protein	C.G.	S.X.	Please select
0.21	1e-28	127	Hordeum vulgare	Contig14313_at	Contig14313	-	-	3e+0	At5g14690	unknown protein	C.G.	S.X.	Please select
0.08	4e-7	57	Oryza sativa	Os06g0168400	AK109865.1	-	Conserved hypothetical protein	6e-2	At5g54610	ANK (ankyrin)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	4e+0	34	Populus trichocarpa	PtpAffx.202741.1.S1_at	pmrna5472	hypothetical protein	-	1e-5	At1g04020	BARD1 (BREAST CANCER ASSOCIATED RING 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e+0	34	Triticum aestivum	TaAffx.86289.1.S1_at	CA612106	-	-	4e+0	At1g80230	cytochrome c oxidase family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Vitis vinifera	1615658_at	CF405207	hypothetical protein LOC100248019	-	2e-2	At3g13160	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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