CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.18583.1.A1_at

Gene name hypothetical protein LOC100273939

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.18583.1.A1_at BM267470 hypothetical protein LOC100273939 - 1e+0 At1g63105 unknown protein S.X. H.G.
0.50 65.7 Zm.11986.1.S1_at CF632895 bifunctional aspartokinase/homoserine dehydrogenase - 8e-7 At5g21060 homoserine dehydrogenase family protein S.X. H.G.
0.27 24.6 Zm.11828.1.A1_at BM381087 - - 9e-1 At5g53680 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.17 10.6 Zm.12981.1.S1_at CA402694 - - 2e+0 At2g17090 SSP (SHORT SUSPENSOR) S.X. H.G.
0.13 6.8 Zm.9832.1.A1_at BM340381 hypothetical protein LOC100279963 - 4e+0 At5g65166 unknown protein S.X. H.G.
0.10 4.6 Zm.9957.1.A1_at AI795644 hypothetical protein LOC100274378 - 3e-9 At1g44542 cyclase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.8 98.6 GSM206295 Lower pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
8.1 98.0 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
8.0 98.0 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.3 97.8 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.0 97.7 GSM206322 Lower pulvinus 60 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.9 97.7 GSM206312 Upper pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.8 97.6 GSM206289 Upper pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.7 97.6 GSM206302 Upper pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.5 97.5 GSM206319 Lower pulvinus 5 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.4 97.5 GSM206294 Lower pulvinus 2 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-1 36 Zm.5420.1.A1_at AI491495 - - 5e-19 At1g74880 NDH-O (NAD(P)H:plastoquinone dehydrogenase complex subunit O) C.G. S.X.
0.02 1e-1 36 Zm.3182.1.A1_at CK827062 hypothetical protein LOC100273880 - 2e-1 At3g13310 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.02 5e-1 34 Zm.8331.1.A1_at BM349811 - - 9e-3 At1g72430 auxin-responsive protein-related C.G. S.X.
0.02 5e-1 34 Zm.34.5.A1_at AI734535 - - 4e-2 At2g36950 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 5e-1 34 Zm.34.5.A1_x_at AI734535 - - 4e-2 At2g36950 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 5e-1 34 Zm.2695.1.S1_at CN844861 hypothetical protein LOC100279628 - 1e-12 At2g44530 ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative C.G. S.X.
0.02 5e-1 34 Zm.19306.1.A1_at AI664819 hypothetical protein LOC100193355 - 6e-1 At4g13720 inosine triphosphate pyrophosphatase, putative / HAM1 family protein C.G. S.X.
0.02 5e-1 34 Zm.18570.1.S1_at CO518308 hypothetical protein LOC100193943 /// hypothetical protein LOC100276686 - 3e+0 At4g08895 inorganic phosphate transporter family protein C.G. S.X.
0.02 5e-1 34 Zm.18323.1.A1_at CO532638 Hypothetical protein LOC100193167 - 5e-1 At4g27120 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At1g63105 842614 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMP - - - C.G. S.X.
0.05 2e+0 34 Glycine max GmaAffx.66197.1.S1_at AI988670 - - 5e+0 Atmg00550 - C.G. S.X.
0.04 5e-1 34 Hordeum vulgare Contig20239_at Contig20239 - - 3e-1 At3g22820 allergen-related C.G. S.X.
0.04 1e-4 48 Oryza sativa Os03g0648600 9631.m04314 - - 3e-1 At5g21170 5'-AMP-activated protein kinase beta-2 subunit, putative C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.218007.1.S1_at pmrna33503 - - 4e-2 At3g23810 SAHH2 (S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2) C.G. S.X.
0.04 3e-1 36 Triticum aestivum TaAffx.9527.1.S1_at CA595981 - - 4e+0 At1g56150 auxin-responsive family protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1620205_at CB919689 hypothetical protein LOC100247667 - 6e-8 At2g36305 FACE2 (FARNESYLATED PROTEIN-CONVERTING ENZYME 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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