Gene omics information

Query gene ID	Zm.18556.1.S1_at
Gene name	versicolorin reductase
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	55.7	Zm.18556.1.S1_at	CO049296	versicolorin reductase	-	3e+0	At1g11230	unknown protein	S.X.	H.G.	Please select
0.40	48.5	Zm.5277.1.A1_at	AI619073	-	-	1e+0	At4g39750	F-box family protein-related	S.X.	H.G.	Please select
0.36	41.3	Zm.45.1.A1_at	D14576.1	glutamine synthetase5	-	2e-51	At3g17820	ATGSKB6	S.X.	H.G.	Please select
0.25	21.3	Zm.10423.1.S1_at	CN844467	fatty acid desaturase8	-	6e-14	At5g05580	FAD8 (FATTY ACID DESATURASE 8)	S.X.	H.G.	Please select
0.24	19.8	Zm.19237.1.A1_at	CA402877	hypothetical protein LOC100216898	-	2e-1	At3g49010	ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1)	S.X.	H.G.	Please select
0.20	14.2	Zm.2355.1.A1_at	CF043465	-	-	9e+0	At3g24770	CLE41 (CLAVATA3/ESR-RELATED 41)	S.X.	H.G.	Please select
0.15	8.6	Zm.12431.1.S1_at	AY106853.1	hypothetical protein LOC100217105	-	4e+0	At4g18400	unknown protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
37.5	99.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.5	99.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.9	99.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.1	99.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.2	98.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320473	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320465	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	2e-30	131	Zm.9135.2.A1_at	BM347885	versicolorin reductase	-	4e-1	At5g59990	-	C.G.	S.X.	Please select
0.03	2e-2	38	Zm.4757.1.A1_at	CF972564	-	-	1e+0	At4g31580	SRZ-22	C.G.	S.X.	Please select
0.01	9e-2	36	Zm.17832.1.S1_at	AB112937.1	plastidic general dicarboxylate transporter	-	7e-8	At5g64290	DIT2.1 (DICARBOXYLATE TRANSPORT 2.1)	C.G.	S.X.	Please select
0.02	3e-1	34	Zm.4341.1.S1_at	CK985951	hypothetical protein LOC100194270	-	7e-7	At4g01830	PGP5 (P-GLYCOPROTEIN 5)	C.G.	S.X.	Please select
0.01	3e-1	34	Zm.14120.1.A1_at	AY108439.1	-	-	7e-30	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	C.G.	S.X.	Please select
0.01	3e-1	34	Zm.14120.1.S1_at	AY105834.1	-	-	7e-30	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	C.G.	S.X.	Please select
0.04	1e+0	32	ZmAffx.983.1.A1_at	AI834087	-	-	1e+1	At3g04530	PPCK2	C.G.	S.X.	Please select
0.04	1e+0	32	ZmAffx.983.1.S1_at	AI834087	-	-	1e+1	At3g04530	PPCK2	C.G.	S.X.	Please select
0.03	1e+0	32	Zm.9143.1.A1_at	BM266858	-	-	2e+1	At5g42070	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	32	Arabidopsis thaliana	At1g11230	837664	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e-3	42	Glycine max	PsAffx.CL2203Contig1_at	PsAffx.CL2203Contig1	-	-	1e+0	At4g11870	unknown protein	C.G.	S.X.	Please select
0.19	3e-5	48	Hordeum vulgare	Contig12299_at	Contig12299	-	-	4e+0	At3g61310	DNA-binding family protein	C.G.	S.X.	Please select
0.27	9e-67	254	Oryza sativa	Os10g0456000	AK067745.1	-	Conserved hypothetical protein	2e+0	At5g15630	IRX6	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.222205.1.S1_x_at	pmrna39466	hypothetical protein	-	3e-9	At4g08850	kinase	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.42	4e-52	204	Triticum aestivum	Ta.19976.1.S1_s_at	CA686163	-	-	4e+0	At1g11230	unknown protein	C.G.	S.X.	Please select
0.04	4e+0	30	Vitis vinifera	1620906_s_at	CB972641	hypothetical protein LOC100246670	-	2e+0	At1g32630	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage