CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.18508.1.S1_at

Gene name uclacyanin-2

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.18508.1.S1_at CO521114 uclacyanin-2 - 5e-1 At1g25300 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein S.X. H.G.
0.55 71.6 Zm.274.2.S1_at CD988484 - - 6e-14 At1g80950 phospholipid/glycerol acyltransferase family protein S.X. H.G.
0.35 38.9 Zm.16892.3.S1_x_at CB281906 calmodulin binding protein - 5e-3 At3g22190 IQD5 (IQ-domain 5) S.X. H.G.
0.33 36.0 Zm.11605.1.A1_at BM379262 - - 4e+0 At4g11930 unknown protein S.X. H.G.
0.31 31.6 Zm.3699.5.A1_at AY107222.1 - - 3e-2 At5g09995 unknown protein S.X. H.G.
0.15 8.6 Zm.6475.2.A1_a_at CO531953 hypothetical protein LOC100273857 /// PHD finger protein - 3e-21 At1g14510 AL7 (ALFIN-LIKE 7) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.2 97.4 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8 97.2 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7 97.2 GSM206303 Upper pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.6 97.1 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.6 97.1 GSM206292 Upper pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.3 96.9 GSM206297 Lower pulvinus 30 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.1 96.8 GSM206298 Lower pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.9 96.7 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.7 96.5 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4 96.2 GSM206308 Lower pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-2 38 Zm.949.1.A1_at CF624182 - - 1e-1 At5g15970 KIN2 C.G. S.X.
0.02 5e-2 38 Zm.949.1.A1_s_at CF624182 hypothetical protein LOC100280024 - 1e-1 At5g15970 KIN2 C.G. S.X.
0.02 5e-2 38 Zm.19212.1.A1_at AY110394.1 - - 1e-1 At1g06160 ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) C.G. S.X.
0.02 5e-2 38 Zm.19212.1.S1_at BE238501 - - 1e-1 At1g06160 ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) C.G. S.X.
0.02 5e-2 38 Zm.19039.1.S1_at BF728709 mitochondrial carnitine/acylcarnitine carrier-like protein - 2e-2 At1g79900 BAC2 C.G. S.X.
0.05 5e-2 38 Zm.17639.1.S1_at CK368504 - - 5e+0 At3g04830 binding C.G. S.X.
0.03 5e-2 38 Zm.11763.1.S1_at CD999409 hypothetical protein LOC100193774 - 9e-34 At3g04500 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.02 5e-2 38 Zm.10137.1.A1_at BM381183 - - 5e+0 At2g21660 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) C.G. S.X.
0.01 2e-1 36 Zm.7145.1.A1_at BE510364 hypothetical protein LOC100193598 - 2e-5 At5g07180 ERL2 (ERECTA-LIKE 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 36 Arabidopsis thaliana At1g25300 839114 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 1e-2 42 Glycine max PsAffx.psZS008xB06f_s_at PsAffx.psZS008xB06f - - 8e-4 At5g28640 AN3 (ANGUSTIFOLIA 3) C.G. S.X.
0.03 2e-1 36 Hordeum vulgare HW09P12u_at HW09P12u - - 4e+0 At4g04330 unknown protein C.G. S.X.
0.40 1e-40 169 Oryza sativa Os12g0454600 9640.m02581 - Plastocyanin-like domain containing protein 6e-3 At2g41260 M17 C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.202700.1.S1_at pmrna5398 hypothetical protein - 8e-1 At1g76820 GTP binding / GTPase C.G. S.X.
0.03 1e-1 38 Triticum aestivum TaAffx.107673.1.S1_at CA696851 - - 3e-1 At1g51090 heavy-metal-associated domain-containing protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1616105_at CA809406 hypothetical protein LOC100266507 - 6e-2 At3g09700 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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