Gene omics information

Query gene ID	Zm.18360.1.S1_at
Gene name	hypothetical protein LOC100192505
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.18360.1.S1_at	CF048305	hypothetical protein LOC100192505	-	2e+0	At2g03130	ribosomal protein L12 family protein	S.X.	H.G.	Please select
0.20	14.2	Zm.4574.1.S1_at	BQ538267	hypothetical protein LOC100191934	-	4e-2	At3g06930	protein arginine N-methyltransferase family protein	S.X.	H.G.	Please select
0.17	10.6	Zm.6460.1.A1_at	BM079919	hypothetical protein LOC100216569	-	5e-3	At2g39130	amino acid transporter family protein	S.X.	H.G.	Please select
0.10	4.6	Zm.13468.1.S1_at	CD443295	hypothetical protein LOC100274971	-	6e+0	At5g58920	unknown protein	S.X.	H.G.	Please select
0.08	3.4	Zm.4696.1.S1_at	BG266403	cycloartenol-C-24-methyltransferase 1	-	5e-2	At5g13710	SMT1 (STEROL METHYLTRANSFERASE 1)	S.X.	H.G.	Please select
0.06	2.3	Zm.4498.1.A1_at	CD446378	hypothetical protein LOC100191506	-	6e+0	At4g20470	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.3	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5	97.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM202319	Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
5.2	96.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.7	96.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.6	96.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	6e-8	57	Zm.17775.1.S1_at	CF627602	50S ribosomal protein L12-2	-	5e+0	At4g14358	-	C.G.	S.X.	Please select
0.03	6e-5	48	Zm.1411.1.S1_at	AW563065	-	-	7e-2	At1g17330	metal-dependent phosphohydrolase HD domain-containing protein-related	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.2474.1.A1_a_at	AI629649	hypothetical protein LOC100193201 /// heterogeneous nuclear ribonucleoprotein 27C	-	9e-10	At4g36960	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.2474.1.A1_x_at	AI629649	heterogeneous nuclear ribonucleoprotein 27C	-	9e-10	At4g36960	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.18683.1.S1_at	CF637245	protein binding protein	-	1e-14	At3g47550	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.03	2e-1	36	Zm.4791.1.A1_at	BM341427	splicing factor 3B subunit 5	-	2e-46	At4g14342	pre-mRNA splicing factor 10 kDa subunit, putative	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.4002.1.A1_at	CF623938	hypothetical LOC542196	-	5e-28	At2g19740	60S ribosomal protein L31 (RPL31A)	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.18124.1.S1_at	AY104334.1	hypothetical protein LOC100275630	-	1e+0	At1g32560	late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein	C.G.	S.X.	Please select
0.02	9e-1	34	Zm.549.1.A1_at	AF244686.1	glutathione S-transferase GST 21	-	2e+0	At2g09840	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At2g03130	814842	ribosomal protein L12 family protein	F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOPMF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	2e-7	57	Glycine max	Gma.14419.1.S1_at	CD402292	-	-	4e-4	At3g06040	ribosomal protein L12 family protein	C.G.	S.X.	Please select
0.09	7e-8	57	Hordeum vulgare	Contig12977_at	Contig12977	-	-	5e+0	At4g16750	DRE-binding transcription factor, putative	C.G.	S.X.	Please select
0.39	3e-50	200	Oryza sativa	Os.25094.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	7e-1	36	Populus trichocarpa	Ptp.4505.1.S1_s_at	CV244818	hypothetical protein	-	3e-5	At3g06040	ribosomal protein L12 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.34	5e-60	232	Triticum aestivum	Ta.6195.1.S1_at	BJ216641	-	-	6e-1	At5g36290	unknown protein	C.G.	S.X.	Please select
0.11	3e-15	81	Vitis vinifera	1607562_at	CB339916	hypothetical protein LOC100260435	-	7e-6	At4g37660	ribosomal protein L12 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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