Gene omics information

Query gene ID	Zm.18237.1.S1_at
Gene name	mitochondrial carrier protein CGI-69
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.1	Zm.18237.1.S1_at	CN845290	mitochondrial carrier protein CGI-69	-	3e-6	At4g27940	mitochondrial substrate carrier family protein	S.X.	H.G.	Please select
0.77	92.1	Zm.10497.1.S1_at	BQ485594	-	-	4e-1	At1g52040	MBP1 (MYROSINASE-BINDING PROTEIN 1)	S.X.	H.G.	Please select
0.67	85.8	Zm.9725.1.S1_at	CF623812	-	-	3e-34	At5g57015	ckl12 (Casein Kinase I-like 12)	S.X.	H.G.	Please select
0.60	77.8	Zm.301.2.A1_at	CO521836	hypothetical protein LOC100276367	-	4e-9	At2g34510	-	S.X.	H.G.	Please select
0.36	41.3	Zm.2234.1.S1_a_at	CO526542	hypothetical protein LOC100276749 /// hypothetical protein LOC100276758	-	2e+1	At5g53486	unknown protein	S.X.	H.G.	Please select
0.22	16.9	Zm.889.1.A1_s_at	M55021.1	-	-	2e-12	At4g38740	ROC1 (ROTAMASE CYP 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.3	99.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.8	99.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.7	99.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.6	99.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.2	99.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.8	98.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.0	98.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	2e-98	359	Zm.18530.1.A1_at	CO531076	-	-	4e-4	At4g27940	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.7863.1.S1_at	BM080209	hypothetical protein LOC100274181	-	2e-7	At3g56720	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.7835.1.A1_at	BM080640	hypothetical protein LOC100273770	-	6e+0	At2g44670	senescence-associated protein-related	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.6278.1.S1_at	CF015568	hypothetical protein LOC100277773	-	2e-2	At5g53590	auxin-responsive family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.3261.1.A1_at	AY104216.1	hypothetical protein LOC100274106	-	2e-57	At4g24830	arginosuccinate synthase family	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.3407.1.S1_at	BM080146	SC3 protein	-	3e-6	At1g32050	secretory carrier membrane protein (SCAMP) family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.17283.1.A1_at	CK368046	hypothetical protein LOC100194129	-	1e-1	At3g51960	bZIP family transcription factor	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.13491.1.S1_at	CK394796	-	-	1e-2	At2g35640	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1132.1.S1_at	BE510664	-	-	1e+0	At1g53210	sodium/calcium exchanger family protein / calcium-binding EF hand family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	3e-6	54	Arabidopsis thaliana	At4g27940	828907	mitochondrial substrate carrier family protein	F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	8e-5	50	Glycine max	GmaAffx.28163.1.S1_at	AW432659	-	-	1e-10	At4g27940	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.53	0	638	Hordeum vulgare	Contig13111_at	Contig13111	-	-	1e-5	At2g46320	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.55	0	856	Oryza sativa	Os08g0386800	AK073889.1	-	Mitochondrial substrate carrier family protein	1e-6	At2g46320	mitochondrial substrate carrier family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	2e-17	91	Populus trichocarpa	PtpAffx.210222.1.S1_at	pmrna20133	hypothetical protein	-	1e-11	At4g27940	mitochondrial substrate carrier family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.52	4e-154	545	Triticum aestivum	TaAffx.101783.1.S1_at	BQ609267	-	-	9e-6	At4g27940	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Vitis vinifera	1608560_at	CF405443	hypothetical protein LOC100250989	-	3e+0	At3g09890	ankyrin repeat family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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