Gene omics information

Query gene ID	Zm.18157.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	94.0	Zm.18157.1.A1_at	CO533028	-	-	2e-1	At4g20290	unknown protein	S.X.	H.G.	Please select
0.77	92.1	ZmAffx.89.1.A1_at	AI665353	hypothetical protein LOC100277768	-	1e+1	At5g20560	beta-1,3-glucanase, putative	S.X.	H.G.	Please select
0.75	90.8	ZmAffx.105.1.S1_at	AI665537	-	-	3e+0	At4g20000	VQ motif-containing protein	S.X.	H.G.	Please select
0.71	88.2	ZmAffx.901.1.A1_at	AI770894	-	-	1e+1	At5g47455	unknown protein	S.X.	H.G.	Please select
0.67	85.8	Zm.5813.1.A1_at	CF056763	hypothetical protein LOC100191474	-	8e-32	At5g55310	TOP1BETA (DNA TOPOISOMERASE 1 BETA)	S.X.	H.G.	Please select
0.63	81.1	Zm.4171.1.A1_at	BG841769	isoamyl acetate-hydrolyzing esterase	-	3e+0	At1g69190	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase/ dihydropteroate synthase	S.X.	H.G.	Please select
0.60	77.8	Zm.11787.1.A1_a_at	BM380772	-	-	6e+0	At5g17523	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
33.1	99.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.4	99.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.6	99.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.4	99.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.2	99.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.7	99.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.0	99.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.1	99.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.6	99.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320458	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	36	Zm.6394.1.A1_at	BM378641	hypothetical protein LOC100192557	-	3e-2	At1g52150	ATHB-15	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.17320.1.A1_at	CK348081	hypothetical protein LOC100277232	-	5e-3	At5g64905	PROPEP3 (Elicitor peptide 3 precursor)	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.17145.1.S1_at	AY211982.1	transparent leaf area peptide	-	9e-1	At3g29020	MYB110 (myb domain protein 110)	C.G.	S.X.	Please select
0.01	4e+0	32	Zm.8953.1.A1_at	AY104644.1	hypothetical protein LOC100280204	-	1e-3	At5g18630	lipase class 3 family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Zm.6536.1.A1_at	CB280826	hypothetical protein LOC100193267	-	2e+0	At5g52750	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.01	4e+0	32	Zm.2094.1.S1_at	CD651096	hypothetical protein LOC100192908	-	8e-19	At2g36060	ubiquitin-conjugating enzyme family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Zm.18525.1.A1_at	CO530497	-	-	1e-4	At5g28150	unknown protein	C.G.	S.X.	Please select
0.01	4e+0	32	Zm.14288.1.A1_at	BM348960	-	-	1e-37	At1g60780	HAP13 (HAPLESS 13)	C.G.	S.X.	Please select
0.02	4e+0	32	Zm.14301.1.S1_at	AI712237	hypothetical protein LOC100192964	-	2e-22	At3g61620	RRP41	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	38	Arabidopsis thaliana	At4g20290	827776	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e-1	38	Glycine max	PsAffx.CL1849Contig1_at	PsAffx.CL1849Contig1	-	-	3e-1	At3g49770	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	32	Hordeum vulgare	Contig13990_at	Contig13990	-	-	3e+0	At4g04745	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	36	Oryza sativa	Os02g0760300	CB682356	-	Immunophilin	2e-8	At5g64350	FKBP12 (FK506-BINDING PROTEIN)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	3e+0	34	Populus trichocarpa	PtpAffx.249.744.A1_s_at	CV236872	hypothetical protein	-	7e-3	At1g31040	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	6e-1	36	Triticum aestivum	Ta.30734.2.A1_at	CA683447	-	-	1e+0	At5g60370	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Vitis vinifera	1614473_at	CB007016	-	-	3e-3	At4g26290	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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