Gene omics information

Query gene ID Zm.18101.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8Zm.18101.1.S1_atCA827356--5e+0At4g36020CSDP1 (cold shock domain protein 1)S.X.H.G.
0.5775.1Zm.13136.1.A1_atCA404810hypothetical protein LOC100191921-4e+0At4g32900aminoacyl-tRNA hydrolaseS.X.H.G.
0.5571.6ZmAffx.1405.1.S1_at40794996-80--0Atmg00510-S.X.H.G.
0.5369.1Zm.13055.2.S1_atCA403909nuclear transcription factor Y subunit B-3-6e-19At4g14540NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)S.X.H.G.
0.4455.7Zm.3876.1.S1_atAY111960.1hypothetical protein LOC100278092-5e+0At4g17030ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)S.X.H.G.
0.4048.5Zm.14940.1.S1_atBM074436hypothetical protein LOC100192835-5e-22At2g2045060S ribosomal protein L14 (RPL14A)S.X.H.G.
0.4048.5Zm.13190.1.A1_atCD433968--2e-1At3g23830GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4)S.X.H.G.
0.3641.3Zm.14944.1.A1_atCB334702--1e+0At5g27020unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.699.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.299.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.599.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.398.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.098.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.598.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.098.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.698.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.298.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.598.1GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9501074Zm.18101.1.S1_x_atCA827356--5e+0At4g36020CSDP1 (cold shock domain protein 1)C.G.S.X.
0.472e-176617Zm.12928.1.A1_atCA401914hypothetical protein LOC100216907-3e+0At3g23360protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.023e-238Zm.18314.1.S1_atCO520519oil yellow1-3e+0At5g45930CHLI2 (MAGNESIUM CHELATASE I2)C.G.S.X.
0.021e-136Zm.6054.1.A1_atAW497492--3e+0At5g25490zinc finger (Ran-binding) family proteinC.G.S.X.
0.015e-134Zm.5319.1.S1_a_atAY103567.1lipoxygenase-4e-7At3g22400LOX5C.G.S.X.
0.025e-134Zm.19263.1.S1_atCO534196hypothetical protein LOC100192665-7e-1At4g11020unknown proteinC.G.S.X.
0.025e-134Zm.1717.1.S1_atCF635749harpin inducing protein-2e+0At3g07260forkhead-associated domain-containing protein / FHA domain-containing proteinC.G.S.X.
0.015e-134Zm.16994.1.A1_atAI649902Methionine synthase-7e-163At5g17920ATMS1C.G.S.X.
0.032e+032ZmAffx.1041.1.A1_atAI881782--3e+0At5g53040RWP-RK domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt4g36020829758CSDP1 (cold shock domain protein 1)Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.---C.G.S.X.
0.102e-344Glycine maxGmaAffx.73787.1.S1_atBM525031--5e-2At5g61605unknown proteinC.G.S.X.
0.316e-72270Hordeum vulgareContig14085_atContig14085--3e+0At5g08060unknown proteinC.G.S.X.
0.328e-96351Oryza sativaOs03g0271600AK067221.1-Zn-finger, RING domain containing protein7e-1At4g11655transmembrane protein, putativeC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.31218.1.A1_atCV243238--5e+0At5g12020HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)C.G.S.X.
0.098e-238Triticum aestivumTaAffx.6798.1.S1_atBQ802663--9e+0At4g35410clathrin adaptor complex small chain family proteinC.G.S.X.
0.036e+030Vitis vinifera1618861_s_atCF604714--1e-9At2g44730transcription factorC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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