CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.18085.1.S1_at

Gene name hypothetical protein LOC100274126

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.18085.1.S1_at CK986038 hypothetical protein LOC100274126 - 5e-11 At5g13800 hydrolase, alpha/beta fold family protein S.X. H.G.
0.61 79.5 Zm.9649.1.A1_at BM337167 hypothetical protein LOC100277264 - 1e+0 At1g43720 unknown protein S.X. H.G.
0.57 75.1 Zm.18460.1.S1_at CO521354 hypothetical protein LOC100216873 - 8e-3 At1g60430 ARPC3 (actin-related protein C3) S.X. H.G.
0.35 38.9 Zm.2234.3.A1_a_at CO526105 hypothetical protein LOC100273895 - 9e-9 At4g17180 glycosyl hydrolase family 17 protein S.X. H.G.
0.34 37.2 Zm.13855.1.A1_at AF439731.1 glycine cleavage complex T-protein - 7e-47 At1g11860 aminomethyltransferase, putative S.X. H.G.
0.25 21.3 ZmAffx.1198.1.S1_at BE056195 - - 2e-1 At1g75040 PR5 (PATHOGENESIS-RELATED GENE 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.2 99.9 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
32.8 99.8 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
30.6 99.8 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
26.7 99.7 GSM253274 ZM_8d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
15.6 99.0 GSM253275 ZM_8d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
11.1 98.5 GSM320445 protocol: mRNA - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9 98.3 GSM253276 ZM_8d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
8.6 98.1 GSM320442 protocol: mRNA - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4 97.5 GSM320446 protocol: mRNA - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5 95.1 GSM320444 protocol: mRNA - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-4 46 Zm.6192.1.S1_a_at CK394758 - - 5e-1 At3g52990 pyruvate kinase, putative C.G. S.X.
0.02 1e-3 44 Zm.6771.1.A1_at CF629244 growth-regulating factor 13-like - 3e-5 At2g36400 AtGRF3 (GROWTH-REGULATING FACTOR 3) C.G. S.X.
0.02 1e-3 44 Zm.4542.1.A1_at AI734680 - - 1e+0 At3g44783 unknown protein C.G. S.X.
0.02 1e-3 44 Zm.12105.1.A1_at BM380148 ATP-dependent transporter YFL028C - 2e-6 At1g03905 ABC transporter family protein C.G. S.X.
0.02 1e-3 44 Zm.10329.1.S1_at BQ163458 hypothetical protein LOC100279503 - 1e+0 At5g20500 glutaredoxin, putative C.G. S.X.
0.02 5e-3 42 Zm.6933.1.A1_at BI679493 hypothetical protein LOC100274350 - 3e+0 At1g33280 ANAC015 (Arabidopsis NAC domain containing protein 15) C.G. S.X.
0.02 5e-3 42 Zm.6008.1.S1_at CA401170 hypothetical protein LOC100216743 - 4e-2 At5g56600 PRF3 (PROFILIN 3) C.G. S.X.
0.02 5e-3 42 Zm.4446.1.S1_at AW520005 hypothetical protein LOC100279946 - 1e-7 At4g14340 CKI1 (CASEIN KINASE I) C.G. S.X.
0.02 5e-3 42 Zm.4152.1.A1_at AI855242 hypothetical protein LOC100277510 - 4e+0 At5g27850 60S ribosomal protein L18 (RPL18C) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 5e-11 69 Arabidopsis thaliana At5g13800 831225 hydrolase, alpha/beta fold family protein F:hydrolase activity, pheophytinase activity;P:chlorophyll catabolic process;C:chloroplast;BOPMAF - - - C.G. S.X.
0.07 5e-15 83 Glycine max GmaAffx.20622.1.A1_at AI856041 - - 2e-5 At5g13800 hydrolase, alpha/beta fold family protein C.G. S.X.
0.49 1e-179 628 Hordeum vulgare Contig5484_at Contig5484 - - 1e-6 At5g13800 hydrolase, alpha/beta fold family protein C.G. S.X.
0.42 3e-165 583 Oryza sativa Os06g0354700 AK068937.1 - Alpha/beta hydrolase fold domain containingprotein 5e-3 At5g13800 hydrolase, alpha/beta fold family protein C.G. S.X.
0.19 3e-16 87 Populus trichocarpa PtpAffx.200810.1.S1_s_at pmrna1588 hypothetical protein - 6e-8 At5g13800 hydrolase, alpha/beta fold family protein C.G. S.X.
0.63 0 936 Triticum aestivum Ta.20644.1.S1_at CA486815 - - 1e-10 At5g13800 hydrolase, alpha/beta fold family protein C.G. S.X.
0.16 3e-16 85 Vitis vinifera 1609451_at CA818791 hypothetical protein LOC100265442 - 1e-13 At5g13800 hydrolase, alpha/beta fold family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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