Gene omics information

Query gene ID	Zm.18071.1.S1_at
Gene name	hypothetical protein LOC100273149
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.18071.1.S1_at	CK849985	hypothetical protein LOC100273149	-	5e-5	At5g40550	unknown protein	S.X.	H.G.	Please select
0.69	86.5	ZmAffx.245.1.S1_at	AI670257	-	-	3e+0	At4g33690	unknown protein	S.X.	H.G.	Please select
0.68	86.1	Zm.15903.2.A1_at	BM266872	-	-	2e-11	At3g10340	PAL4 (Phenylalanine ammonia-lyase 4)	S.X.	H.G.	Please select
0.64	81.7	Zm.1638.1.S1_at	CF628096	hypothetical protein LOC100192625	-	2e-15	At4g27090	60S ribosomal protein L14 (RPL14B)	S.X.	H.G.	Please select
0.63	81.1	RPTR-Zm-J01347-4_at	RPTR-Zm-J01347-4	-	-	0			S.X.	H.G.	Please select
0.62	79.8	RPTR-Zm-J01636-1_at	RPTR-Zm-J01636-1	-	-	0			S.X.	H.G.	Please select
0.60	77.8	Zm.12244.2.S1_at	AI668243	-	-	9e-1	At5g46940	invertase/pectin methylesterase inhibitor family protein	S.X.	H.G.	Please select
0.60	77.8	Zm.144.1.S1_x_at	U10696.1	metallothionein2	-	2e+1	At5g38344	transmembrane receptor	S.X.	H.G.	Please select
0.59	76.1	RPTR-Zm-X17220-1_at	RPTR-Zm-X17220-1	-	-	0			S.X.	H.G.	Please select
0.56	74.4	ZmAffx.357.1.A1_at	AI670544	-	-	6e-1	At5g67070	RALFL34 (ralf-like 34)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.6	96.4	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.5	96.3	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.2	96.0	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.0	95.8	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.7	95.4	GSM206294	Lower pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.7	95.4	GSM206293	Right pulvinus control total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.5	95.1	GSM206288	Upper pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.5	95.1	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.4	94.9	GSM206292	Upper pulvinus 60 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.3	94.7	GSM206318	Lower pulvinus 2 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-6	54	Zm.14007.1.A1_s_at	CA831578	40S ribosomal protein S28	-	3e-7	At5g03850	40S ribosomal protein S28 (RPS28B)	C.G.	S.X.	Please select
0.04	1e-6	54	Zm.14007.1.A1_at	CA831578	-	-	3e-7	At5g03850	40S ribosomal protein S28 (RPS28B)	C.G.	S.X.	Please select
0.02	2e-5	50	Zm.8449.1.A1_at	CK828099	hypothetical protein LOC100276511	-	8e-1	At3g61070	PEX11E	C.G.	S.X.	Please select
0.03	5e-3	42	Zm.12271.1.A1_at	CF650430	hypothetical protein LOC100191452	-	8e-2	At4g13200	unknown protein	C.G.	S.X.	Please select
0.02	8e-2	38	Zm.8842.1.A1_at	BM075870	hypothetical protein LOC100193075	-	1e+0	At2g40670	ARR16 (ARABIDOPSIS RESPONSE REGULATOR 16)	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.7869.1.A1_at	BM080228	calmodulin binding protein	-	2e+1	At5g26731	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.9615.1.A1_at	BM338182	hypothetical protein LOC100272870	-	5e-1	At3g49820	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.8731.1.A1_at	BM338633	-	-	8e-2	At1g62990	KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7)	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.7059.1.S1_at	CD219109	3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase	-	8e-1	At4g36660	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	5e-5	50	Arabidopsis thaliana	At5g40550	834053	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	3e-7	57	Glycine max	GmaAffx.5182.2.S1_at	AW186428	-	-	4e-15	At3g27460	unknown protein	C.G.	S.X.	Please select
0.42	1e-136	486	Hordeum vulgare	Contig6718_s_at	Contig6718	-	-	1e-8	At5g40550	unknown protein	C.G.	S.X.	Please select
0.47	1e-158	561	Oryza sativa	Os.13552.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	2e-5	52	Populus trichocarpa	Ptp.438.1.S1_at	CK317792	hypothetical protein	-	2e-18	At5g40550	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.41	4e-101	369	Triticum aestivum	Ta.9706.1.S1_a_at	BQ169555	-	-	3e-3	At5g40550	unknown protein	C.G.	S.X.	Please select
0.09	2e-10	65	Vitis vinifera	1614120_at	CB349861	-	-	4e-3	At5g40550	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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