CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.18047.1.S1_at

Gene name hypothetical protein LOC100275732

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.18047.1.S1_at CF623859 hypothetical protein LOC100275732 - 2e+0 At5g42250 alcohol dehydrogenase, putative S.X. H.G.
0.50 65.7 Zm.8376.1.S1_at BM073880 hypothetical protein LOC100280303 - 4e-1 At3g44590 60S acidic ribosomal protein P2 (RPP2D) S.X. H.G.
0.44 55.7 Zm.3845.1.A1_at AI711969 hypothetical protein LOC100274222 - 2e-7 At5g38470 DNA repair protein RAD23, putative S.X. H.G.
0.35 38.9 Zm.5237.1.A1_at AY107290.1 hypothetical protein LOC100273890 - 2e-19 At1g47260 GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2) S.X. H.G.
0.29 28.1 Zm.9586.1.A1_at BM333269 hypothetical protein LOC100276026 - 7e-1 At2g42130 unknown protein S.X. H.G.
0.22 16.9 Zm.3615.1.A1_at AW330686 hypothetical protein LOC100191498 - 3e-9 At1g73670 ATMPK15 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.1 96.8 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.3 96.1 GSM205424 Mo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.7 95.4 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.7 95.4 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5 95.1 GSM205427 Mo17xB73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.4 94.9 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0 94.0 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9 93.8 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-3 44 Zm.8445.1.S1_at BM078620 hypothetical protein LOC100193211 - 5e-4 At2g23780 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 1e-3 44 Zm.5911.1.S1_at AY108752.1 dimethyladenosine transferase - 7e-4 At2g47420 dimethyladenosine transferase, putative C.G. S.X.
0.02 1e-3 44 Zm.10931.1.A1_at AW091179 hypothetical protein LOC100193417 - 3e-2 At4g15080 zinc finger (DHHC type) family protein C.G. S.X.
0.02 1e-3 44 Zm.10249.1.A1_at BM497740 - - 1e-1 At2g35460 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
0.03 1e-3 44 Zm.10247.1.S1_at BU049731 - - 1e+1 At4g29820 CFIM-25 C.G. S.X.
0.02 4e-3 42 Zm.4836.1.A1_at BM078446 fb14 - 2e-8 At2g47690 NADH-ubiquinone oxidoreductase-related C.G. S.X.
0.03 4e-3 42 Zm.17838.1.S1_at CD999196 phytosulfokine precursor protein containing protein - 6e-3 At2g22860 ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR) C.G. S.X.
0.03 4e-3 42 Zm.12619.1.A1_at BM953641 hypothetical protein LOC100193537 - 4e+0 At5g39880 unknown protein C.G. S.X.
0.02 4e-3 42 Zm.1233.1.S1_at BQ280193 - - 4e-8 At5g58470 TAF15b (TBP-ASSOCIATED FACTOR 15b) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At5g42250 834230 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV - - - C.G. S.X.
0.03 2e-1 38 Glycine max GmaAffx.39551.1.S1_at AW306994 - - 7e-12 At3g04950 unknown protein C.G. S.X.
0.34 1e-86 319 Hordeum vulgare Contig11027_at Contig11027 - - 5e-1 At1g07135 glycine-rich protein C.G. S.X.
0.38 1e-108 395 Oryza sativa Os06g0298500 AK108252.1 - Conserved hypothetical protein 2e+0 Atmg01150 - C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.215740.1.S1_at pmrna30106 hypothetical protein - 2e+0 At4g26410 - C.G. S.X.
0.31 6e-84 311 Triticum aestivum Ta.6149.1.S1_at CD920230 - - 6e-1 At1g07135 glycine-rich protein C.G. S.X.
0.03 6e-1 34 Vitis vinifera 1607744_at CB972166 - - 4e+0 At4g09830 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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