Gene omics information

Query gene ID Zm.18044.1.A1_at
Gene name RNA polymerase II largest subunit
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.6Zm.18044.1.A1_atAF519538.1RNA polymerase II largest subunit-2e-123At4g35800NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)S.X.H.G.
0.7389.9Zm.15394.1.S1_atBM268179hypothetical protein LOC100194032 /// adhesive/proline-rich protein /// adhesive/proline-rich protein-5e+0At4g08730unknown proteinS.X.H.G.
0.6785.8Zm.8970.1.A1_atCO527395hypothetical protein LOC100193936-5e-1At3g11910UBP13 (UBIQUITIN-SPECIFIC PROTEASE 13)S.X.H.G.
0.6179.5Zm.35.1.S1_x_atAY434688.1--5e-1At4g33690unknown proteinS.X.H.G.
0.5065.7ZmAffx.401.1.S1_atAI676829--2e-1At5g46030unknown proteinS.X.H.G.
0.4352.8Zm.6732.1.S1_s_atAF440221.1HMG-like nucleosome/chromatin assembly factor D-3e-11At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.999.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
34.299.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.499.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
31.299.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.099.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.199.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.799.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.799.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.199.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6804357Zm.18044.1.S1_atAF519538.1RNA polymerase II largest subunit-2e-123At4g35800NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)C.G.S.X.
0.017e-136Zm.5277.1.A1_atAI619073--1e+0At4g39750F-box family protein-relatedC.G.S.X.
0.017e-136Zm.5277.1.S1_atAI619073--1e+0At4g39750F-box family protein-relatedC.G.S.X.
0.013e+034Zm.5522.1.A1_atAI622432hypothetical protein LOC100272415-1e+0At5g23950C2 domain-containing proteinC.G.S.X.
0.013e+034Zm.5029.1.A1_atAY109139.1hypothetical protein LOC100272501-2e+0At1g04445zinc finger (C2H2 type) family proteinC.G.S.X.
0.013e+034Zm.456.1.S1_atAF019145.2maize insect resistance1-5e-2At4g11320cysteine proteinase, putativeC.G.S.X.
0.013e+034Zm.3979.1.S1_atAY106386.1hypothetical protein LOC100273391-7e-13At3g22845emp24/gp25L/p24 protein-relatedC.G.S.X.
0.013e+034Zm.2755.1.A1_atAW067098target of rapamycin-7e-31At1g50030TOR (TARGET OF RAPAMYCIN)C.G.S.X.
0.013e+034Zm.2376.3.S1_a_atBG873775ADP-ribosylation factor GTPase-activating protein 3-7e-20At2g35210RPA (ROOT AND POLLEN ARFGAP)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.192e-123444Arabidopsis thalianaAt4g35800829734NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.---C.G.S.X.
0.016e-138Glycine maxGmaAffx.90836.1.S1_atCF806561--1e+0Atmg00840-C.G.S.X.
0.013e+034Hordeum vulgareContig16043_atContig16043--1e-7At3g27120ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingC.G.S.X.
0.4402274Oryza sativaOsAffx.18625.2.S1_at---0C.G.S.X.
0.181e-116422Populus trichocarpaPtpAffx.225664.1.S1_atpmrna45174--2e-174At4g35800NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)C.G.S.X.
0.049e-1893Triticum aestivumTaAffx.51117.1.S1_atCA730838--1e-24At4g35800NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)C.G.S.X.
0.028e-342Vitis vinifera1616848_atCF511470hypothetical protein LOC100250406-1e+0At1g24575unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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