Gene omics information

Query gene ID	Zm.17983.1.A1_at
Gene name	hypothetical protein LOC100276768
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.17983.1.A1_at	BG840853	hypothetical protein LOC100276768	-	1e+0	At2g40910	F-box protein-related	S.X.	H.G.	Please select
0.50	65.7	Zm.17562.1.S1_at	CF040421	hypothetical protein LOC100280253	-	5e+0	At1g48330	unknown protein	S.X.	H.G.	Please select
0.40	48.5	Zm.564.1.S1_a_at	AF244704.1	glutathione S-transferase GST 39	-	3e-2	At2g36640	ATECP63 (EMBRYONIC CELL PROTEIN 63)	S.X.	H.G.	Please select
0.35	38.9	Zm.6131.1.S1_at	AY105213.1	hypothetical protein LOC100191528	-	7e-1	At1g74560	NRP1 (NAP1-RELATED PROTEIN 1)	S.X.	H.G.	Please select
0.25	21.3	Zm.4710.1.A1_at	AI738125	hypothetical protein LOC100280041	-	3e+0	At4g34410	RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1)	S.X.	H.G.	Please select
0.17	10.6	Zm.6538.1.A1_at	CK348062	stress-related protein	-	7e+0	Atmg00270	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.5	96.3	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.3	94.7	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.1	94.3	GSM202319	Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.0	94.0	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.0	94.0	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.9	93.8	GSM202310	B73 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
2.9	93.8	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.9	93.8	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8	93.5	GSM202296	B73xMo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8	93.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-1	36	Zm.9769.1.A1_at	BM338306	-	-	8e-2	At3g09960	calcineurin-like phosphoesterase family protein	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.9562.1.S1_at	D88452.1	aldehyde oxidase-2	-	4e-5	At5g20960	AAO1 (ARABIDOPSIS ALDEHYDE OXIDASE 1)	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.6805.2.S1_at	AY105407.1	DNA-binding protein HEXBP	-	1e-1	At3g26420	ATRZ-1A	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.4164.2.A1_at	CF627018	-	-	6e+0	At4g19640	ARA7	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.43.1.S1_a_at	U05226.1	late embryogenesis abundant protein, group 3 /// lea protein group3	-	2e-3	At1g70190	ribosomal protein L12 family protein	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.11662.1.A1_at	BM379784	-	-	6e-1	At1g50930	unknown protein	C.G.	S.X.	Please select
0.03	9e+0	30	ZmAffx.1294.1.S1_at	40794996-137	-	-	0	Atmg01270	-	C.G.	S.X.	Please select
0.02	9e+0	30	Zm.8770.1.A1_at	BM075563	-	-	5e+0	At5g60680	unknown protein	C.G.	S.X.	Please select
0.02	9e+0	30	Zm.6527.2.A1_at	BM338554	hypothetical protein LOC100273254	-	5e-1	At1g12090	ELP (EXTENSIN-LIKE PROTEIN)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	Arabidopsis thaliana	At2g40910	818688	F-box protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	2e+0	34	Glycine max	PsAffx.CL281Contig1_at	PsAffx.CL281Contig1	-	-	2e+0	At3g15640	cytochrome c oxidase family protein	C.G.	S.X.	Please select
0.03	3e+0	32	Hordeum vulgare	EBem06_SQ004_E07_s_at	EBem06_SQ004_E07	-	-	3e+0	At4g15140	unknown protein	C.G.	S.X.	Please select
0.18	5e-48	192	Oryza sativa	Os11g0579700	AK107579.1	-	Hypothetical protein	1e-2	At3g57500	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	8e+0	32	Populus trichocarpa	PtpAffx.220332.1.S1_at	pmrna36706	-	-	6e+0	At1g11572	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.46	2e-135	482	Triticum aestivum	TaAffx.112722.1.S1_at	CA621565	-	-	4e+0	At3g12440	extensin family protein	C.G.	S.X.	Please select
0.03	7e+0	30	Vitis vinifera	1615325_at	CF201465.1	-	-	2e+0	At1g75550	glycine-rich protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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