Gene omics information

Query gene ID Zm.17961.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4455.7Zm.17961.1.A1_atCK826694--1e-4At1g79050DNA repair protein recAS.X.H.G.
0.4048.5Zm.1506.1.A1_atX82184.1defence-related protein-1e-1At3g04720PR4 (PATHOGENESIS-RELATED 4)S.X.H.G.
0.3538.9Zm.19167.2.A1_x_atCF636656Hypothetical protein LOC100194096-9e+0At4g13160unknown proteinS.X.H.G.
0.1912.8Zm.1297.1.S1_atBE345371hypothetical protein LOC100276762-1e+0At1g23670unknown proteinS.X.H.G.
0.169.4Zm.17082.1.S1_s_atAY108221.1--4e-12At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)S.X.H.G.
0.094.0Zm.8589.1.A1_atBM074786--2e+1At5g42655-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
43.499.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
43.199.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.399.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.199.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.499.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.999.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.699.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.998.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.198.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.897.9GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-134Zm.5077.1.A1_atAY106102.1hypothetical protein LOC100217191-5e-2At3g28070nodulin MtN21 family proteinC.G.S.X.
0.037e-134Zm.5077.1.A1_x_atAY106102.1hypothetical protein LOC100217191-5e-2At3g28070nodulin MtN21 family proteinC.G.S.X.
0.037e-134Zm.5077.1.A1_s_atAY106102.1hypothetical protein LOC100217191-5e-2At3g28070nodulin MtN21 family proteinC.G.S.X.
0.027e-134Zm.2245.2.A1_atCF634375hypothetical protein LOC100217191-2e-1At3g28070nodulin MtN21 family proteinC.G.S.X.
0.013e+032Zm.6667.1.A1_atAW067052--2e-16At1g02890AAA-type ATPase family proteinC.G.S.X.
0.013e+032Zm.6667.1.S1_atBM348822--2e-16At1g02890AAA-type ATPase family proteinC.G.S.X.
0.023e+032Zm.6316.1.A1_atAI691367--2e+0At5g22430unknown proteinC.G.S.X.
0.023e+032Zm.19088.1.A1_atCO518225hypothetical protein LOC100194181-1e+0At1g10750unknown proteinC.G.S.X.
0.011e+130Zm.8995.1.A1_atAY107473.1glutaryl-CoA dehydrogenase-2e-7At3g51840ACX4 (ACYL-COA OXIDASE 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-448Arabidopsis thalianaAt1g79050844246DNA repair protein recAF:nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding;P:DNA repair, SOS response, DNA recombination, DNA metabolic process;C:chloroplast;BOAMPFV---C.G.S.X.
0.036e-136Glycine maxGmaAffx.78459.1.S1_atBI972274--2e-4At1g21245wall-associated kinase-relatedC.G.S.X.
0.023e+032Hordeum vulgareContig25010_atContig25010--3e-1At4g32900aminoacyl-tRNA hydrolaseC.G.S.X.
0.028e-136Oryza sativaOs12g0142900AK119906.1-Peptidase aspartic family protein4e-1At4g22380ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinC.G.S.X.
0.031e-138Populus trichocarpaPtpAffx.204460.1.S1_s_atpmrna8745hypothetical protein-1e-2At5g13640ATPDATC.G.S.X.
0.031e-138Triticum aestivumTa.18102.1.S1_atCD912332--1e-3At1g56170NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)C.G.S.X.
0.035e-134Vitis vinifera1616879_atCF512295similar to armadillo/beta-catenin repeat family protein-4e+0At5g14360ubiquitin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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