Gene omics information

Query gene ID Zm.1783.1.S1_at
Gene name protein binding protein
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8094.0Zm.1783.1.S1_atAY109631.1protein binding protein-1e+1At5g24860FPF1 (FLOWERING PROMOTING FACTOR 1)S.X.H.G.
0.8395.6Zm.6381.1.A1_atCO534945hypothetical protein LOC100273528-2e+0At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)S.X.H.G.
0.7389.9Zm.6874.2.S1_atCF637577--3e-3At2g45430DNA-binding protein-relatedS.X.H.G.
0.6785.8Zm.4336.1.S1_atCA403908hypothetical protein LOC100274309-4e+0At5g38580-S.X.H.G.
0.6785.8Zm.6872.1.A1_atAI065521--2e+0At1g27920MAP65-8 (MICROTUBULE-ASSOCIATED PROTEIN 65-8)S.X.H.G.
0.3538.9Zm.12612.1.A1_atBU050513--6e-1At1g23260MMZ1 (MMS ZWEI HOMOLOGUE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.796.5GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.396.1GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.296.0GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.394.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.893.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.893.5GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.893.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.893.5GSM206287Left pulvinus control total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
2.793.2GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydis
2.793.2GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.5901427Zm.1783.1.A1_atAY109631.1--1e+1At5g24860FPF1 (FLOWERING PROMOTING FACTOR 1)C.G.S.X.
0.146e-24111Zm.16320.1.S1_atCO526259hypothetical protein LOC100193231-3e-6At3g19910zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.017e-238Zm.6079.2.S1_atCO53363560S ribosomal protein L23a-2e-62At2g39460RPL23AA (RIBOSOMAL PROTEIN L23AA)C.G.S.X.
0.017e-238Zm.2057.1.S1_atAY029557.1DNA methyltransferase ZMET4-5e-8At5g25480DNMT2 (DNA METHYLTRANSFERASE-2)C.G.S.X.
0.027e-238Zm.15768.1.A1_atCD446659hypothetical protein LOC100194013-3e-14At2g21190ER lumen protein retaining receptor family proteinC.G.S.X.
0.017e-238Zm.13476.2.S1_atCF043863hypothetical protein LOC100276044-4e+0At5g66658unknown proteinC.G.S.X.
0.027e-238Zm.13443.1.A1_atU08225.1Histone H2A-4e-11At5g02560HTA12C.G.S.X.
0.013e-136Zm.818.2.A1_atCO531833Hypothetical protein LOC100216560-1e+1At5g67490unknown proteinC.G.S.X.
0.013e-136Zm.818.2.S1_atCO531833hypothetical protein LOC100216560-1e+1At5g67490unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+132Arabidopsis thalianaAt5g24860832555FPF1 (FLOWERING PROMOTING FACTOR 1)encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.---C.G.S.X.
0.034e-344Glycine maxGma.5882.1.S1_atBQ610122--2e-1At2g16600ROC3C.G.S.X.
0.431e-105383Hordeum vulgareContig9804_atContig9804--2e-3At3g19910zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.411e-71272Oryza sativaOs09g0535100AK069888.1-Zn-finger, RING domain containing protein3e+0At3g19910zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.072e-861Populus trichocarpaPtpAffx.7190.1.A1_s_atCV270522hypothetical protein-3e-30At3g19910zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.361e-100367Triticum aestivumTa.1651.1.S1_atBQ579658--8e-1At3g19910zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e-136Vitis vinifera1608950_atCF606755hypothetical protein LOC100251050-1e-6At5g19200short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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