Gene omics information

Query gene ID	Zm.17783.1.S1_at
Gene name	ML domain protein
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	95.6	Zm.17783.1.S1_at	CK370693	ML domain protein	-	1e-1	At1g75550	glycine-rich protein	S.X.	H.G.	Please select
0.30	29.8	Zm.6920.1.A1_at	CK348056	-	-	3e-9	At1g08190	vacuolar assembly protein, putative (VPS41)	S.X.	H.G.	Please select
0.27	24.6	Zm.15085.1.A1_at	AI065806	-	-	4e-11	At4g14070	AAE15 (acyl-activating enzyme 15)	S.X.	H.G.	Please select
0.20	14.2	Zm.17295.1.A1_at	CK347563	-	-	2e+0	At2g18050	HIS1-3 (HISTONE H1-3)	S.X.	H.G.	Please select
0.17	10.6	Zm.6347.1.A1_at	BG266068	-	-	4e+0	At5g15260	structural constituent of ribosome	S.X.	H.G.	Please select
0.09	4.0	ZmAffx.1102.1.S1_at	AW181177	-	-	8e-1	At4g33560	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.7	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.7	99.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.4	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.8	98.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.0	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM205424	Mo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
7.3	97.8	GSM205431	Mo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	3e-6	52	Zm.3529.1.A1_a_at	CO528072	hypothetical protein LOC100193299 /// hypothetical protein LOC100273402	-	2e+0	At3g11150	unknown protein	C.G.	S.X.	Please select
0.09	3e-6	52	Zm.3529.1.A1_x_at	CO528072	hypothetical protein LOC100273402	-	2e+0	At3g11150	unknown protein	C.G.	S.X.	Please select
0.09	3e-6	52	Zm.3529.1.A1_at	CO528072	hypothetical protein LOC100273402	-	2e+0	At3g11150	unknown protein	C.G.	S.X.	Please select
0.05	1e-2	40	Zm.7176.1.A1_a_at	CF629363	-	-	5e+0	At5g05210	nucleolar matrix protein-related	C.G.	S.X.	Please select
0.05	1e-2	40	Zm.7176.1.A1_at	CF629363	-	-	5e+0	At5g05210	nucleolar matrix protein-related	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.65.1.S1_at	AJ007366.1	calcium-dependent protein kinase	-	2e-12	At5g04870	CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1)	C.G.	S.X.	Please select
0.05	5e-2	38	Zm.3529.2.S1_at	CK369278	hypothetical protein LOC100193299	-	1e+0	At1g75050	-	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.3109.1.A1_at	CK370523	Hypothetical protein LOC100194150	-	2e-1	At1g08710	F-box family protein	C.G.	S.X.	Please select
0.02	5e-2	38	Zm.10513.2.S1_a_at	AY106791.1	hypothetical protein LOC100277818	-	3e-3	At1g68390	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-1	38	Arabidopsis thaliana	At1g75550	843891	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-1	38	Glycine max	GmaAffx.10118.1.S1_at	BQ081339	-	-	2e-1	At5g67490	unknown protein	C.G.	S.X.	Please select
0.37	8e-38	157	Hordeum vulgare	Contig6889_at	Contig6889	-	-	1e+0	At2g35640	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.38	1e-64	248	Oryza sativa	Os03g0788200	AK106623.1	-	E1 protein and Def2/Der2 allergen family protein	9e-2	At4g16500	cysteine protease inhibitor family protein / cystatin family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e-1	38	Populus trichocarpa	PtpAffx.202434.1.S1_at	pmrna4878	hypothetical protein	-	1e-2	At5g24500	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.30	9e-21	101	Triticum aestivum	Ta.7287.2.S1_x_at	CA641518	-	-	4e+0	At2g25670	unknown protein	C.G.	S.X.	Please select
0.03	3e-2	38	Vitis vinifera	1609519_at	CF603152	hypothetical protein LOC100259523	-	7e-5	At3g01820	adenylate kinase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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