Gene omics information

Query gene ID Zm.17776.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.8Zm.17776.1.S1_atCK370381--1e+0At5g28030cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putativeS.X.H.G.
0.6785.8Zm.18100.4.A1_atCD999582ACT domain containing protein-4e-2At5g04740ACT domain-containing proteinS.X.H.G.
0.5571.6ZmAffx.211.1.S1_atAI670219--1e+1At5g66430S-adenosyl-L-methionine:carboxyl methyltransferase family proteinS.X.H.G.
0.5065.7Zm.13029.1.A1_atCA400580--2e+0At4g32840PFK6 (PHOSPHOFRUCTOKINASE 6)S.X.H.G.
0.158.6Zm.5083.2.S1_atAY109962.1--1e-22At5g22060ATJ2S.X.H.G.
0.062.3Zm.12617.1.S1_atCD441264--1e+0At3g13920EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.798.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.198.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.898.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.898.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.398.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.098.2GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydis
9.098.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.798.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.797.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.497.5GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-444Zm.17751.1.S1_atCK371154--1e+0At1g14210ribonuclease T2 family proteinC.G.S.X.
0.045e-444Zm.17311.1.S1_atCK369090hypothetical protein LOC100275390-1e+0At2g2772060S acidic ribosomal protein P2 (RPP2A)C.G.S.X.
0.045e-444Zm.17166.1.A1_atCK370745--4e+0At5g65730xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
0.022e-342Zm.3644.1.S1_atCO525387hypothetical protein AY111178 /// hypothetical protein LOC100191318 /// hypothetical protein LOC100217011-8e-1At5g66390peroxidase 72 (PER72) (P72) (PRXR8)C.G.S.X.
0.032e-342Zm.19307.1.S1_atBM337427--6e+0At5g58730pfkB-type carbohydrate kinase family proteinC.G.S.X.
0.032e-342Zm.17981.1.A1_atCK827727hypothetical protein LOC100277738-5e+0At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.032e-342Zm.17627.1.A1_atCK369147hypothetical protein LOC100272868-3e-1At4g37990ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)C.G.S.X.
0.032e-342Zm.17564.1.S1_atCK369792AGG2-2e+0At1g68585unknown proteinC.G.S.X.
0.038e-340Zm.6024.1.A1_atAW066865--2e+0At5g18500protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt5g28030832873cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putativeF:pyridoxal phosphate binding, cysteine synthase activity, catalytic activity;P:cysteine biosynthetic process from serine, cysteine biosynthetic process, metabolic process;C:unknown;BOFPMA---C.G.S.X.
0.032e+034Glycine maxGmaAffx.16348.1.S1_atAW278007--1e+1At4g24026unknown proteinC.G.S.X.
0.292e-40165Hordeum vulgareContig20663_atContig20663--5e-1Atmg01310-C.G.S.X.
0.112e-1687Oryza sativaOs05g0159200AK067837.1-Lipolytic enzyme, G-D-S-L family protein2e-4At2g27360lipase, putativeC.G.S.X.
0.036e+032Populus trichocarpaPtpAffx.221279.1.S1_atpmrna38048hypothetical protein-1e-2At5g58660oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.232e-1583Triticum aestivumTaAffx.110781.1.S1_atCA654501--3e+0At5g47450AtTIP2C.G.S.X.
0.033e-134Vitis vinifera1611648_atCD718429--5e+0At3g05540-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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