Gene omics information

Query gene ID Zm.17728.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.17728.1.A1_atCF631523--1e+0At3g25573unknown proteinS.X.H.G.
0.4455.7Zm.10119.1.A1_atAW330816hypothetical protein LOC100274094-6e-9At2g47910CRR6 (chlororespiratory reduction 6)S.X.H.G.
0.4251.3Zm.13303.1.S1_atCA827309--4e+0At1g27390TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)S.X.H.G.
0.4048.5Zm.12674.1.A1_atCN845329--5e-5At1g34350unknown proteinS.X.H.G.
0.3844.2Zm.10098.1.A1_atCO531187hypothetical protein LOC100272958-2e-2At2g44060late embryogenesis abundant family protein / LEA family proteinS.X.H.G.
0.3641.3Zm.17862.1.A1_atCO520595serine/threonine-protein kinase WNK4-5e+0At4g09440unknown proteinS.X.H.G.
0.3437.2ZmAffx.785.1.S1_atAI759084--3e+0At5g51780basix helix-loop-helix (bHLH) family proteinS.X.H.G.
0.3233.4ZmAffx.777.1.A1_atAI746253hypothetical protein LOC100191464-2e-1At5g11440CID5S.X.H.G.
0.3131.6Zm.12433.1.S1_atAY105016.1tyrosyl-tRNA synthetase-4e-18At2g33840tRNA synthetase class I (W and Y) family proteinS.X.H.G.
0.2928.1Zm.15416.1.A1_atCD448025--2e-1At1g68862unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
46.3100.0GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
42.599.9GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
27.799.7GSM375791Deep-sowing 10d treatment GA3, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
22.399.5GSM375796Deep-sowing 10d treatment GA3, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
20.099.3GSM375794Deep-sowing 10d treatment UCZ, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
15.098.9GSM375797Deep-sowing 10d treatment UCZ, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
14.898.9GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
14.798.9GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
13.598.8GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
11.198.5GSM385707Deep-sowing 10d treatment IAA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.588e-65246Zm.2147.1.A1_s_atBM380613glycine-rich cell wall structural protein-4e-1At4g01995unknown proteinC.G.S.X.
0.598e-65246Zm.2147.2.A1_atBM341580--1e+0At5g17210unknown proteinC.G.S.X.
0.588e-65246Zm.2147.1.A1_a_atBM380613glycine-rich cell wall structural protein-4e-1At4g01995unknown proteinC.G.S.X.
0.025e-134Zm.5177.1.A1_atAY105486.1--2e+0At5g03710unknown proteinC.G.S.X.
0.025e-134Zm.5177.1.S1_atCK394817ATP-dependent Clp protease ATP-binding subunit clpA-2e+0At5g03710unknown proteinC.G.S.X.
0.035e-134Zm.349.1.A1_atCF060508hypothetical protein LOC100273805 /// 60S acidic ribosomal protein P1-3e-5At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
0.045e-134Zm.2920.1.A1_atAI673848hypothetical protein LOC100272381-6e-1At3g06300AT-P4H-2 (A. THALIANA P4H ISOFORM 2)C.G.S.X.
0.025e-134Zm.1409.2.S1_atBQ486262pectinesterase inhibitor domain containing protein-2e+0At3g28455CLE25 (CLAVATA3/ESR-RELATED 25)C.G.S.X.
0.012e+032Zm.743.1.S1_atBG321150hypothetical protein LOC100275158-5e-2At5g65360histone H3C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt3g255736240974unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P---C.G.S.X.
0.032e+034Glycine maxGmaAffx.82693.1.S1_atAW185906--4e+0At5g53220unknown proteinC.G.S.X.
0.083e-1581Hordeum vulgareContig9925_atContig9925--8e-2At3g4459060S acidic ribosomal protein P2 (RPP2D)C.G.S.X.
0.042e-138Oryza sativaOsAffx.4905.1.S1_at---0C.G.S.X.
0.037e+032Populus trichocarpaPtpAffx.219435.1.S1_atpmrna35356--4e+1At5g06950AHBP-1BC.G.S.X.
0.099e-548Triticum aestivumTa.28886.1.S1_atCA700076--4e+0At5g55570unknown proteinC.G.S.X.
0.036e+030Vitis vinifera1617094_atBQ797397hypothetical protein LOC100262837-1e-15At5g35410SOS2 (SALT OVERLY SENSITIVE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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