Gene omics information

Query gene ID	Zm.17629.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.17629.1.A1_at	CD435755	-	-	2e-6	At5g64550	loricrin-related	S.X.	H.G.	Please select
0.67	85.8	Zm.4160.1.A1_at	CF243936	indole-3-acetate beta-glucosyltransferase	-	1e-2	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	S.X.	H.G.	Please select
0.60	77.8	Zm.17630.1.A1_at	CK348094	-	-	4e-1	At1g06760	histone H1, putative	S.X.	H.G.	Please select
0.50	65.7	Zm.4616.2.A1_at	CF637845	Hypothetical protein LOC100193318	-	9e-1	At3g25980	mitotic spindle checkpoint protein, putative (MAD2)	S.X.	H.G.	Please select
0.40	48.5	Zm.11837.1.A1_at	BM381140	hypothetical protein LOC100275424	-	1e+0	At4g16380	metal ion binding	S.X.	H.G.	Please select
0.17	10.6	Zm.16513.1.A1_at	CF634462	hypothetical protein LOC100273404	-	0	At5g09810	ACT7 (ACTIN 7)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.9	98.7	GSM206325	Upper pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
8.3	98.0	GSM206331	Lower pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.6	97.9	GSM206329	Right pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.4	97.8	GSM206301	Upper pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.3	97.8	GSM206326	Upper pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.6	97.6	GSM206323	Left pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.4	97.5	GSM206327	Upper pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.3	97.4	GSM206332	Lower pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.3	97.4	GSM206330	Lower pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.4	97.0	GSM206324	Upper pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.59	4e-141	500	Zm.3593.1.A1_at	AW000438	-	-	5e+0	At3g02242	unknown protein	C.G.	S.X.	Please select
0.05	3e-3	42	Zm.17100.1.S1_a_at	CF972476	hypothetical protein LOC100217230	-	2e-6	At5g64550	loricrin-related	C.G.	S.X.	Please select
0.01	8e-1	34	Zm.588.1.S1_at	AF142322.1	yin-yang1	-	2e-7	At4g06634	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.7864.1.A1_at	BM080210	-	-	7e+0	At5g05220	unknown protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.5168.1.A1_at	CD446730	hypothetical protein LOC100191535	-	2e-8	At1g06660	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.4320.1.A1_at	BM079885	hypothetical protein LOC100276939	-	5e+0	At5g02502	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.3027.1.A1_at	AY107517.1	hypothetical protein LOC100192895	-	1e-6	At3g10970	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.295.1.A1_at	AI065608	fae2 protein	-	2e-20	At2g26640	KCS11 (3-KETOACYL-COA SYNTHASE 11)	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.2033.1.A1_at	CO524092	hypothetical protein LOC100274598	-	2e+0	At1g19160	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-6	54	Arabidopsis thaliana	At5g64550	836576	loricrin-related	F:molecular_function unknown;P:unknown;C:unknown;MPOBFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e+0	34	Glycine max	PsAffx.CL561Contig1_at	PsAffx.CL561Contig1	-	-	5e+0	At2g40230	transferase family protein	C.G.	S.X.	Please select
0.38	2e-32	139	Hordeum vulgare	Contig9167_at	Contig9167	-	-	2e-4	At5g64550	loricrin-related	C.G.	S.X.	Please select
0.21	2e-57	224	Oryza sativa	Os04g0458200	AK101398.1	-	Conserved hypothetical protein	1e-6	At5g64550	loricrin-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	3e-12	73	Populus trichocarpa	Ptp.3553.1.S1_at	DN493158	hypothetical protein	-	8e-37	At5g09670	loricrin-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.72	7e-148	523	Triticum aestivum	Ta.26769.1.A1_at	CD491103	-	-	6e+0	At3g02242	unknown protein	C.G.	S.X.	Please select
0.19	2e-37	155	Vitis vinifera	1614392_at	CF207745	hypothetical protein LOC100249189	-	2e-26	At5g64550	loricrin-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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