CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.17628.1.S1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 99.2 Zm.17628.1.S1_at CN845468 - - 6e-17 At2g34560 katanin, putative S.X. H.G.
0.67 85.8 Zm.6962.1.S1_at CA404020 sorbitol dehydrogenase - 2e-1 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative S.X. H.G.
0.67 85.8 Zm.17366.1.S1_s_at CK371241 - - 1e+1 At5g20060 phospholipase/carboxylesterase family protein S.X. H.G.
0.67 85.8 Zm.8865.1.A1_at BM267927 hypothetical protein LOC100191271 - 3e-9 At5g35460 unknown protein S.X. H.G.
0.57 75.1 Zm.15542.1.S1_at CD219383 - - 2e-2 At4g29080 PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2) S.X. H.G.
0.53 69.1 Zm.38.1.S1_at M60215.1 ser/thr protein phosphatase1 - 1e-12 At2g29400 TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1) S.X. H.G.
0.32 33.4 Zm.6863.2.A1_at CF637783 hypothetical protein LOC100193970 - 7e-67 At1g48410 AGO1 (ARGONAUTE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.0 98.6 GSM162264 Mutant 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.9 97.7 GSM205436 B73xMo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.3 97.4 GSM205421 B73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.2 97.4 GSM205425 B73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.6 97.1 GSM205433 B73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.4 96.2 GSM205422 Mo17xB73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.2 96.0 GSM205429 B73xMo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.0 95.8 GSM205423 B73xMo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.9 95.7 GSM205434 Mo17xB73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.6 95.2 GSM205424 Mo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 1e-59 230 Zm.14474.1.S1_a_at CD001875 hypothetical protein LOC100273044 - 1e-33 At2g34560 katanin, putative C.G. S.X.
0.20 1e-59 230 Zm.14474.1.A1_at AY104519.1 - - 1e-33 At2g34560 katanin, putative C.G. S.X.
0.02 1e-3 44 Zm.5464.1.A1_at AI622048 hypothetical protein LOC100272690 - 2e+0 At1g62790 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.02 1e-3 44 Zm.17215.1.A1_at CO523350 RING zinc finger protein-like - 2e+0 At5g51440 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) C.G. S.X.
0.02 5e-3 42 Zm.8232.1.A1_s_at CF623743 hypothetical protein LOC100191804 - 4e-1 At1g02405 proline-rich family protein C.G. S.X.
0.02 5e-3 42 Zm.8232.1.A1_at CF623743 hypothetical protein LOC100191804 - 4e-1 At1g02405 proline-rich family protein C.G. S.X.
0.02 5e-3 42 Zm.8268.1.S1_at CK826607 thioredoxin M-type - 1e-1 At5g39950 ATTRX2 (THIOREDOXIN 2) C.G. S.X.
0.01 5e-3 42 Zm.5111.1.A1_at AW506740 hypothetical protein LOC100193449 - 4e-36 At4g27690 VPS26B (VACUOLAR PROTEIN SORTING 26B) C.G. S.X.
0.01 5e-3 42 Zm.394.1.S1_at U95180.1 hypothetical protein LOC100193093 - 2e-1 At1g23340 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 6e-17 89 Arabidopsis thaliana At2g34560 818020 katanin, putative F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:protein metabolic process;C:unknown;OBMFPAV - - - C.G. S.X.
0.33 3e-75 284 Glycine max GmaAffx.1055.2.S1_at BE347580 - - 5e-54 At2g34560 katanin, putative C.G. S.X.
0.26 6e-71 268 Hordeum vulgare HU05K13u_at HU05K13u - - 3e-1 At2g34560 katanin, putative C.G. S.X.
0.61 0 1039 Oryza sativa Os01g0673500 AK069899.1 - Katanin 6e-45 At2g34560 katanin, putative C.G. S.X.
0.29 7e-36 153 Populus trichocarpa PtpAffx.157374.1.S1_a_at CK091516 hypothetical protein - 2e-28 At2g34560 katanin, putative C.G. S.X.
0.33 9e-47 188 Triticum aestivum TaAffx.112168.1.S1_at CA626462 - - 2e-29 At2g34560 katanin, putative C.G. S.X.
0.31 2e-82 305 Vitis vinifera 1608494_at CF603964 hypothetical protein LOC100253260 - 1e-76 At2g34560 katanin, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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