Gene omics information

Query gene ID	Zm.17591.2.S1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	94.0	Zm.17591.2.S1_at	CK347917	-	-	2e-52	At1g14670	endomembrane protein 70, putative	S.X.	H.G.	Please select
0.77	92.1	ZmAffx.786.1.A1_at	AI759096	-	-	3e-3	At1g72450	JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)	S.X.	H.G.	Please select
0.71	88.2	Zm.8375.1.A1_at	BM080176	-	-	2e-2	At5g25450	ubiquinol-cytochrome C reductase complex 14 kDa protein, putative	S.X.	H.G.	Please select
0.67	85.8	Zm.4625.1.A1_at	AI737394	-	-	8e-1	At1g78630	emb1473 (embryo defective 1473)	S.X.	H.G.	Please select
0.67	85.8	Zm.9891.1.A1_at	BM350582	-	-	1e+0	At5g27290	unknown protein	S.X.	H.G.	Please select
0.44	55.7	ZmAffx.925.1.S1_at	AI795348	-	-	8e-1	At1g43171	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
37.1	99.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
33.7	99.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.1	99.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.5	99.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.7	99.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.5	99.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.3	99.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.6	99.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.0	99.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.38	0	864	Zm.17591.1.A1_a_at	AW288561	transmembrane 9 superfamily protein member 1 /// transmembrane 9 superfamily protein member 1	-	3e-44	At2g01970	endomembrane protein 70, putative	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.2704.1.S1_a_at	AW066934	-	-	2e-44	At3g44850	protein kinase-related	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.2704.1.S1_at	AW066934	-	-	2e-44	At3g44850	protein kinase-related	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.8519.1.A1_at	BQ635374	hypothetical protein LOC100274605	-	5e+0	At3g11745	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.5143.1.A1_at	AY107731.1	hypothetical protein LOC100276623	-	1e-1	At1g74730	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.1115.1.A1_at	AY104250.1	-	-	1e+0	At4g00210	LBD31 (LOB DOMAIN-CONTAINING PROTEIN 31)	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.1115.1.S1_at	AY104250.1	-	-	1e+0	At4g00210	LBD31 (LOB DOMAIN-CONTAINING PROTEIN 31)	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.1115.1.A1_a_at	AY104250.1	4F5 protein family protein	-	1e+0	At4g00210	LBD31 (LOB DOMAIN-CONTAINING PROTEIN 31)	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.9566.1.S1_at	AF332180.1	beta-expansin 7	-	6e-1	At3g49630	2-oxoacid-dependent oxidase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	2e-52	206	Arabidopsis thaliana	At1g14670	838029	endomembrane protein 70, putative	F:unknown;P:transport;C:integral to membrane, Golgi apparatus, membrane;MPOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.58	1e-79	297	Glycine max	GmaAffx.91748.1.S1_s_at	CF807473	-	-	1e-102	At2g01970	endomembrane protein 70, putative	C.G.	S.X.	Please select
0.44	0	805	Hordeum vulgare	Contig3992_at	Contig3992	-	-	1e-40	At1g14670	endomembrane protein 70, putative	C.G.	S.X.	Please select
0.37	6e-153	541	Oryza sativa	Os10g0112600	AK099727.1	-	Nonaspanin (TM9SF) family protein	4e-37	At2g01970	endomembrane protein 70, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.35	4e-70	266	Populus trichocarpa	Ptp.1915.1.S1_at	AF187853.1	hypothetical protein	-	4e-101	At5g37310	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.35	1e-90	333	Triticum aestivum	Ta.15555.1.S1_at	CA485454	-	-	2e+0	At2g23610	MES3 (METHYL ESTERASE 3)	C.G.	S.X.	Please select
0.10	4e-11	67	Vitis vinifera	1614620_at	CF404986	hypothetical protein LOC100249044	-	5e-37	At5g37310	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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