CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.17590.1.A1_at

Gene name hypothetical protein LOC100191237

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 76.1 Zm.17590.1.A1_at CK144918 hypothetical protein LOC100191237 - 3e-46 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative S.X. H.G.
0.80 94.0 Zm.5436.1.A1_at AI833498 - - 3e+0 At3g06470 GNS1/SUR4 membrane family protein S.X. H.G.
0.57 75.1 Zm.1338.1.A1_at AY107813.1 - - 6e+0 At5g15350 plastocyanin-like domain-containing protein S.X. H.G.
0.42 51.3 Zm.4.2.A1_at CA401225 - - 2e-3 At5g11860 NLI interacting factor (NIF) family protein S.X. H.G.
0.14 7.7 Zm.10062.1.A1_at BM378648 hypothetical protein LOC100280233 - 4e-4 At5g16000 NIK1 (NSP-INTERACTING KINASE 1) S.X. H.G.
0.06 2.3 Zm.10069.1.S1_at AY108373.1 - - 4e+0 At5g03460 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.5 96.3 GSM253255 ZM_24h_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.3 96.1 GSM253252 ZM_24h_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.1 95.9 GSM375794 Deep-sowing 10d treatment UCZ, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
3.7 95.4 GSM320443 protocol: mRNA - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6 95.2 GSM253244 ZM_12h_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.6 95.2 GSM375797 Deep-sowing 10d treatment UCZ, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
3.5 95.1 GSM323171 Zm_SG200Dpep1_24hpi_II GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
3.4 94.9 GSM253248 ZM_12h_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.3 94.7 GSM253256 ZM_2d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.2 94.5 GSM253250 ZM_24h_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-8 59 Zm.5962.1.S1_a_at AY241545.1 glyoxalase I - 1e-17 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.14 2e-8 59 Zm.5962.1.S1_at AY241545.1 glyoxalase I - 1e-17 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.02 2e-2 40 Zm.5322.1.A1_a_at AY103724.1 hypothetical protein LOC100273032 /// hypothetical protein LOC100274445 - 9e-152 At5g19990 RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) C.G. S.X.
0.02 2e-2 40 Zm.5322.1.A1_at AY103724.1 hypothetical protein LOC100274445 - 9e-152 At5g19990 RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) C.G. S.X.
0.01 8e-2 38 Zm.706.1.A1_at AY108440.1 - - 5e-2 At1g44835 YbaK/prolyl-tRNA synthetase family protein C.G. S.X.
0.01 8e-2 38 Zm.10841.1.A1_at BQ619556 hydroxymethylbutenyl 4-diphosphate synthase - 2e-64 At5g60600 HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE) C.G. S.X.
0.02 3e-1 36 Zm.5962.4.A1_x_at AI714685 Glyoxalase I - 8e-7 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.02 3e-1 36 Zm.1711.1.A1_at CO534032 clathrin assembly protein - 3e-1 At2g34800 unknown protein C.G. S.X.
0.01 1e+0 34 Zm.4129.1.S1_at BM351239 pre-mRNA-splicing factor SLT11 - 7e-14 At1g07360 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 3e-46 186 Arabidopsis thaliana At1g67280 843048 lactoylglutathione lyase, putative / glyoxalase I, putative F:lactoylglutathione lyase activity, metal ion binding;P:response to cold, carbohydrate metabolic process;C:thylakoid, thylakoid lumen, stromule, chloroplast, chloroplast stroma;BOMFPA - - - C.G. S.X.
0.10 1e-12 75 Glycine max Gma.5683.2.S1_at CA935387 - - 7e-75 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.53 0 827 Hordeum vulgare Contig4938_s_at Contig4938 - - 8e-47 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.49 0 900 Oryza sativa Os.22487.1.S1_at - - - 0 C.G. S.X.
0.39 1e-46 188 Populus trichocarpa Ptp.1178.1.A1_at CV265898 hypothetical protein - 2e-71 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.55 0 803 Triticum aestivum Ta.23813.1.S1_at CK157489 - - 2e-37 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.34 8e-66 250 Vitis vinifera 1609873_at CB341501 hypothetical protein LOC100247523 - 2e-69 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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