Gene omics information

Query gene ID	Zm.17558.1.S1_at
Gene name	hypothetical protein LOC100273430
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.2	Zm.17558.1.S1_at	CK370895	hypothetical protein LOC100273430	-	5e-5	At4g01050	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.67	85.8	Zm.12621.1.A1_at	BU051165	-	-	4e-9	At2g24580	sarcosine oxidase family protein	S.X.	H.G.	Please select
0.67	85.8	Zm.12129.1.S1_at	BM380039	-	-	7e-1	At1g28330	DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)	S.X.	H.G.	Please select
0.42	51.3	Zm.8240.1.A1_at	BM073391	hypothetical protein LOC100274496	-	5e+0	At5g23900	60S ribosomal protein L13 (RPL13D)	S.X.	H.G.	Please select
0.25	21.3	Zm.1069.1.A1_at	AW066696	myristoyl-acyl carrier protein thioesterase	-	4e-1	At4g13050	acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl-(acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative	S.X.	H.G.	Please select
0.15	8.6	ZmAffx.830.1.A1_at	AI770534	-	-	6e+0	At5g40930	TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.1	97.4	GSM206305	Right pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.7	97.2	GSM206307	Lower pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.4	97.0	GSM206331	Lower pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.3	96.9	GSM206302	Upper pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.2	96.9	GSM206300	Upper pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.0	96.7	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.8	96.6	GSM206330	Lower pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.7	96.5	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.6	96.4	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.6	96.4	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-3	42	Zm.13364.1.A1_at	CA989003	-	-	3e+0	At1g22910	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.02	2e-2	40	Zm.8482.1.S1_at	BM074322	inhibitor of growth protein 5	-	3e-12	At3g24010	ING1 (INHIBITOR OF GROWTH 1)	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.1855.1.A1_at	CO520028	-	-	5e-2	At2g03230	-	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.6005.1.A1_at	AY108292.1	-	-	5e-1	At4g18500	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.6005.1.S1_a_at	AY108292.1	MYB transcription factor TaMYB1	-	2e+0	At1g29460	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.4357.3.S1_at	AY104397.1	hypothetical protein LOC100191858 /// splicing factor U2af 38 kDa subunit	-	3e-22	At1g27650	ATU2AF35A	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.2220.1.S1_at	BQ442034	hypothetical protein LOC100278819	-	5e-1	At2g21780	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.18511.1.S1_at	CO523535	zinc transporter 4	-	1e-18	At1g10970	ZIP4 (ZINC TRANSPORTER 4 PRECURSOR)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1820.1.S1_at	CF009592	-	-	2e-3	At5g46780	VQ motif-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-5	50	Arabidopsis thaliana	At4g01050	827921	hydroxyproline-rich glycoprotein family protein	hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e-2	40	Glycine max	PsAffx.psHB041xG13f_s_at	PsAffx.psHB041xG13f	-	-	4e+0	At1g10230	ASK18 (ARABIDOPSIS SKP1-LIKE 18)	C.G.	S.X.	Please select
0.11	9e-8	57	Hordeum vulgare	Contig20396_at	Contig20396	-	-	6e+0	Atmg00240	-	C.G.	S.X.	Please select
0.33	2e-92	341	Oryza sativa	Os02g0114000	CB675710	-	SNF2-related domain containing protein	1e+0	At4g21800	QQT2 (quatre-quart2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	1e+0	36	Populus trichocarpa	PtpAffx.217149.1.S1_at	pmrna32297	hypothetical protein	-	9e+0	At5g57920	plastocyanin-like domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.40	2e-26	121	Triticum aestivum	Ta.10323.1.S1_at	BJ315407	-	-	3e+0	At3g30370	-	C.G.	S.X.	Please select
0.02	2e-1	36	Vitis vinifera	1614756_at	CB003977	-	-	3e-1	At1g26761	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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