Gene omics information

Query gene ID	Zm.17525.1.S1_at
Gene name	sucrose transport protein 4
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	89.9	Zm.17525.1.S1_at	AY639018.1	sucrose transport protein 4	-	3e-13	At1g09960	SUT4 (SUCROSE TRANSPORTER 4)	S.X.	H.G.	Please select
0.50	65.7	Zm.6026.1.S1_at	CA405322	hypothetical protein LOC100194158	-	7e-21	At3g07100	protein transport protein Sec24, putative	S.X.	H.G.	Please select
0.28	28.1	Zm.1090.4.A1_at	BQ547886	-	-	2e+0	At4g17585	unknown protein	S.X.	H.G.	Please select
0.27	24.6	Zm.15883.1.A1_at	BM268182	hypothetical protein LOC100192037	-	4e-1	At5g66380	ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1)	S.X.	H.G.	Please select
0.23	18.6	ZmAffx.1046.1.A1_at	AI881792	-	-	8e-1	At1g79160	unknown protein	S.X.	H.G.	Please select
0.07	2.9	Zm.2125.1.S1_at	AA979871	NADH ubiquinone oxidoreductase1	-	8e-19	At5g52840	NADH-ubiquinone oxidoreductase-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.7	97.2	GSM206330	Lower pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.9	96.7	GSM206329	Right pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.8	96.6	GSM206305	Right pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.8	96.6	GSM206299	Left pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.5	96.3	GSM206307	Lower pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.3	96.1	GSM206306	Lower pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.3	96.1	GSM253275	ZM_8d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
4.2	96.0	GSM253276	ZM_8d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.8	95.5	GSM253264	ZM_4d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.8	95.5	GSM253262	ZM_4d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-6	54	Zm.199.1.S1_s_at	AB008464.1	sucrose transporter1	-	2e-2	At1g22710	SUC2 (SUCROSE-PROTON SYMPORTER 2)	C.G.	S.X.	Please select
0.02	1e-4	48	Zm.10553.1.A1_at	CD441187	-	-	4e+0	At1g22710	SUC2 (SUCROSE-PROTON SYMPORTER 2)	C.G.	S.X.	Please select
0.02	7e-3	42	Zm.618.1.S1_at	AF326506.1	tonoplast membrane integral protein ZmTIP4-2	-	1e-2	At2g25810	TIP4	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.606.1.A2_s_at	AF326493.1	plasma membrane integral protein ZmPIP2-2 /// plasma membrane intrinsic protein2	-	1e-37	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.606.1.A1_at	AF326493.1	plasma membrane intrinsic protein2	-	1e-37	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.600.1.S1_at	AY243802.1	plasma membrane intrinsic protein	-	9e-34	At2g37170	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.4913.1.A1_at	CD441543	hypothetical protein LOC100280306	-	3e-25	At1g75330	OTC (ORNITHINE CARBAMOYLTRANSFERASE)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.1316.1.A1_at	AY106193.1	hypothetical protein LOC100194245	-	1e-24	At5g61240	protein binding	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.65.1.S1_at	AJ007366.1	calcium-dependent protein kinase	-	2e-12	At5g04870	CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	3e-13	77	Arabidopsis thaliana	At1g09960	837530	SUT4 (SUCROSE TRANSPORTER 4)	low affinity (10mM) sucrose transporter in sieve elements (phloem)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-3	46	Glycine max	GmaAffx.77855.1.S1_at	BI784806	-	-	2e-8	At1g09960	SUT4 (SUCROSE TRANSPORTER 4)	C.G.	S.X.	Please select
0.50	6e-133	474	Hordeum vulgare	Contig11063_at	Contig11063	-	-	3e-1	At5g11770	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	C.G.	S.X.	Please select
0.44	0	1178	Oryza sativa	Os12g0641400	AB091672.1	-	Sucrose transporter	9e-18	At1g09960	SUT4 (SUCROSE TRANSPORTER 4)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	9e-2	40	Populus trichocarpa	PtpAffx.249.20.S1_x_at	CV281016	hypothetical protein	-	2e+0	At5g47710	C2 domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.23	1e-43	178	Triticum aestivum	Ta.6575.1.S1_a_at	BJ308154	-	-	2e-4	At1g22710	SUC2 (SUCROSE-PROTON SYMPORTER 2)	C.G.	S.X.	Please select
0.13	1e-9	63	Vitis vinifera	1620256_at	AF021808.1	sucrose transporter-like	-	2e-29	At1g09960	SUT4 (SUCROSE TRANSPORTER 4)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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