Gene omics information

Query gene ID	Zm.17521.1.S1_at
Gene name	complex 1 protein containing protein
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	94.0	Zm.17521.1.S1_at	CK370540	complex 1 protein containing protein	-	2e+0	At4g39340	unknown protein	S.X.	H.G.	Please select
0.80	94.0	ZmAffx.936.1.S1_at	AI677620	-	-	3e+0	At3g10490	anac052 (Arabidopsis NAC domain containing protein 52)	S.X.	H.G.	Please select
0.73	89.9	Zm.14476.2.A1_at	AY109949.1	Protein disulfide isomerase	-	1e-5	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	S.X.	H.G.	Please select
0.71	88.2	Zm.13679.1.A1_at	AW424469	chemocyanin	-	9e-5	At1g72230	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.53	69.1	Zm.5313.2.A1_at	CA398418	60S ribosomal protein L12	-	9e-9	At2g37190	60S ribosomal protein L12 (RPL12A)	S.X.	H.G.	Please select
0.33	36.0	Zm.6973.1.A1_at	AY109828.1	Hypothetical protein LOC100216936	-	5e-1	At4g28830	methyltransferase/ nucleic acid binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.6	99.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.4	98.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM206292	Upper pulvinus 60 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.57	0	662	Zm.7644.1.A1_at	CF632662	complex 1 protein containing protein	-	4e-1	At4g12080	DNA-binding family protein	C.G.	S.X.	Please select
0.22	4e-64	244	Zm.7644.2.S1_at	BM341428	-	-	4e+0	At5g23760	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.22	4e-64	244	Zm.7644.2.S1_x_at	BM341428	-	-	4e+0	At5g23760	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.03	2e-1	36	Zm.9832.1.A1_at	BM340381	hypothetical protein LOC100279963	-	4e+0	At5g65166	unknown protein	C.G.	S.X.	Please select
0.01	7e-1	34	Zm.515.1.S1_at	AF273767.1	protoporphyrinogen IX oxidase	-	4e-3	At5g14220	HEMG2	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.9377.1.A1_at	AY109233.1	hypothetical protein LOC100275736	-	4e-1	At3g10610	40S ribosomal protein S17 (RPS17C)	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.5967.1.A1_at	AI665973	RNA polymerase IV second largest subunit	-	6e-21	At3g23780	NRPD2A	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.5561.1.A1_at	CF631787	calcineurin B-like protein	-	8e-4	At5g47100	CBL9	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.4119.1.S1_at	AI854985	ATP binding protein	-	2e-4	At3g09010	protein kinase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At4g39340	830089	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	9e+0	32	Glycine max	PsAffx.psML009xE23f_at	PsAffx.psML009xE23f	-	-	1e+1	At4g13615	four F5 protein-related / 4F5 protein-related	C.G.	S.X.	Please select
0.03	8e-1	34	Hordeum vulgare	Contig19921_at	Contig19921	-	-	4e+0	At5g65940	CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1)	C.G.	S.X.	Please select
0.26	3e-28	127	Oryza sativa	Os08g0278600	AK110711.1	-	Complex 1 LYR protein family protein	2e+0	At2g34450	high mobility group (HMG1/2) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e-4	48	Populus trichocarpa	PtpAffx.112471.1.S1_at	DN496621	hypothetical protein	-	2e+0	At2g32720	CB5-B (CYTOCHROME B5 ISOFORM B)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.15	3e-17	89	Triticum aestivum	Ta.9524.1.S1_at	BQ162599	-	-	2e+0	At1g79130	auxin-responsive family protein	C.G.	S.X.	Please select
0.04	1e-1	36	Vitis vinifera	1611732_at	CF215219	hypothetical protein LOC100257805	-	3e-2	At4g37750	ANT (AINTEGUMENTA)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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