Gene omics information

Query gene ID	Zm.17512.1.S1_at
Gene name	hypothetical protein LOC100192897
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.46	58.4	Zm.17512.1.S1_at	CF057479	hypothetical protein LOC100192897	-	2e-9	At4g25590	ADF7 (actin depolymerizing factor 7)	S.X.	H.G.	Please select
0.50	65.7	ZmAffx.1118.1.A1_at	AW355922	-	-	3e+0	At5g66330	leucine-rich repeat family protein	S.X.	H.G.	Please select
0.35	38.9	Zm.10632.1.A1_at	BQ538717	-	-	6e-3	At2g45530	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.26	22.7	Zm.6312.1.A1_at	CF043412	-	-	1e+0	At3g20557	unknown protein	S.X.	H.G.	Please select
0.23	18.6	Zm.8846.1.A1_at	BM337343	-	-	4e+0	At3g29250	copper ion binding / oxidoreductase	S.X.	H.G.	Please select
0.17	10.6	Zm.7954.1.A1_at	BM080605	-	-	4e+0	At2g37240	-	S.X.	H.G.	Please select
0.17	10.6	ZmAffx.912.1.A1_at	AI770956	-	-	5e-2	At4g01580	transcriptional factor B3 family protein	S.X.	H.G.	Please select
0.15	8.6	Zm.16978.1.A1_at	CF646243	hypothetical protein LOC100275636	-	1e+0	At4g10800	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.7	97.9	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.9	97.3	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.6	97.1	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.3	96.9	GSM206331	Lower pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.1	96.8	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.1	96.8	GSM202296	B73xMo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.1	96.8	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.8	96.6	GSM206301	Upper pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.7	96.5	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.6	96.4	GSM206299	Left pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	2e-44	178	Zm.67.1.S1_at	AY104025.1	Actin-depolymerizing factor	-	3e-5	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please select
0.22	5e-42	171	Zm.16036.1.S1_at	CF010440	actin depolymerizing factor	-	1e-7	At5g52360	ADF10 (ACTIN DEPOLYMERIZING FACTOR 10)	C.G.	S.X.	Please select
0.24	7e-38	157	Zm.3832.1.S1_at	AY112267.1	actin-depolymerizing factor	-	1e-13	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please select
0.23	3e-34	145	Zm.10502.1.S1_at	CO521816	actin-depolymerizing factor	-	3e-17	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please select
0.17	2e-23	109	Zm.15444.1.S1_at	CK347287	actin-depolymerizing factor	-	6e-25	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please select
0.07	6e-23	107	Zm.1019.1.A1_at	AW288674	actin-depolymerizing factor 5	-	2e-19	At2g16700	ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)	C.G.	S.X.	Please select
0.05	2e-1	36	Zm.2992.1.A1_a_at	BQ619311	actin depolymerizing factor	-	4e-11	At5g59890	ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)	C.G.	S.X.	Please select
0.05	2e-1	36	Zm.2992.1.A1_x_at	BQ619311	actin depolymerizing factor	-	4e-11	At5g59890	ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)	C.G.	S.X.	Please select
0.07	2e-1	36	Zm.2992.2.S1_s_at	AI881218	actin depolymerizing factor /// actin-depolymerizing factor 3	-	4e-5	At5g59890	ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.19	2e-9	63	Arabidopsis thaliana	At4g25590	828664	ADF7 (actin depolymerizing factor 7)	F:actin binding;P:biological_process unknown;C:intracellular;MPOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.15	6e-7	56	Glycine max	Gma.4270.1.S1_at	CF920385	-	-	2e-19	At3g46010	ADF1 (ACTIN DEPOLYMERIZING FACTOR 1)	C.G.	S.X.	Please select
0.44	1e-89	329	Hordeum vulgare	Contig5010_at	Contig5010	-	-	3e-20	At5g59890	ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)	C.G.	S.X.	Please select
0.30	4e-52	206	Oryza sativa	Os04g0555700	AK069329.1	-	Actin-depolymerizing factor (ADF)	2e-18	At4g25590	ADF7 (actin depolymerizing factor 7)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.14	6e-10	65	Populus trichocarpa	PtpAffx.42674.2.S1_at	CK317906	actin depolymerizing factor 7	-	1e-22	At5g59890	ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.40	8e-83	307	Triticum aestivum	Ta.5577.1.S1_at	BJ320308	-	-	3e-11	At3g46000	ADF2 (ACTIN DEPOLYMERIZING FACTOR 2)	C.G.	S.X.	Please select
0.16	6e-13	73	Vitis vinifera	1617797_s_at	CF210697	hypothetical protein LOC100263260	-	6e-46	At3g46010	ADF1 (ACTIN DEPOLYMERIZING FACTOR 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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