Gene omics information

Query gene ID	Zm.1747.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	65.7	Zm.1747.1.A1_at	CF633743	-	-	5e-1	At4g19270	unknown protein	S.X.	H.G.	Please select
0.77	92.1	Zm.8847.1.A1_at	BM075896	-	-	1e+0	At1g25410	ATIPT6	S.X.	H.G.	Please select
0.61	79.5	Zm.8704.1.A1_at	BM334351	hypothetical protein LOC100275569	-	7e-1	At5g07590	WD-40 repeat protein family	S.X.	H.G.	Please select
0.61	79.5	Zm.9522.1.A1_at	BM269538	-	-	1e+1	At3g11940	ATRPS5A (RIBOSOMAL PROTEIN 5A)	S.X.	H.G.	Please select
0.55	71.6	Zm.884.1.A1_at	AF334143.1	phosphofructose kinase1	-	1e-69	At1g07110	F2KP (FRUCTOSE-2,6-BISPHOSPHATASE)	S.X.	H.G.	Please select
0.50	65.7	Zm.9942.1.A1_at	CK368883	hypothetical protein LOC100274544	-	8e-2	At5g63740	zinc finger protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.3	99.4	GSM206288	Upper pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
18.6	99.2	GSM206296	Lower pulvinus 15 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
17.8	99.1	GSM206300	Upper pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
15.7	99.0	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
14.4	98.9	GSM206289	Upper pulvinus 5 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
11.3	98.5	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
11.2	98.5	GSM206295	Lower pulvinus 5 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.2	98.2	GSM206307	Lower pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
8.9	98.2	GSM206298	Lower pulvinus 60 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
8.5	98.1	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.61	0	807	Zm.675.2.A1_at	AF332178.1	beta-expansin 5	-	3e-1	At4g19270	unknown protein	C.G.	S.X.	Please select
0.59	0	807	Zm.675.2.S1_at	AF332178.1	beta-expansin 5	-	3e-1	At4g19270	unknown protein	C.G.	S.X.	Please select
0.57	0	718	Zm.9566.1.S1_at	AF332180.1	beta-expansin 7	-	6e-1	At3g49630	2-oxoacid-dependent oxidase, putative	C.G.	S.X.	Please select
0.43	2e-115	414	Zm.17425.1.S1_at	CK145186	beta-expansin 1a	-	3e+0	At5g61510	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.36	1e-67	256	Zm.9565.1.A1_at	BM381516	beta-expansin 3	-	6e-1	At4g19270	unknown protein	C.G.	S.X.	Please select
0.34	1e-67	256	Zm.13944.1.A1_at	AF332181.1	beta-expansin 8	-	5e-2	At5g55650	unknown protein	C.G.	S.X.	Please select
0.35	7e-48	190	Zm.13944.3.S1_a_at	AA072435	Beta-expansin 8	-	3e-3	At5g40630	ubiquitin family protein	C.G.	S.X.	Please select
0.16	7e-48	190	Zm.13944.3.A1_at	AF332175.1	Beta-expansin 8	-	3e-3	At1g27250	paired amphipathic helix repeat-containing protein	C.G.	S.X.	Please select
0.35	4e-40	165	Zm.674.1.S1_at	AF332179.1	beta-expansin 6	-	9e+0	At4g26470	calcium ion binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-1	36	Arabidopsis thaliana	At4g19270	827667	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	8e-1	36	Glycine max	GmaAffx.22297.2.S1_at	BM271210	-	-	2e-1	At1g53610	unknown protein	C.G.	S.X.	Please select
0.48	1e-139	496	Hordeum vulgare	Contig2877_at	Contig2877	-	-	6e-1	At4g19270	unknown protein	C.G.	S.X.	Please select
0.45	6e-138	492	Oryza sativa	Os10g0555900	AF261271.1	-	Beta-expansin precursor	7e-1	At4g19270	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	3e+0	34	Populus trichocarpa	PtpAffx.216814.1.S1_at	pmrna31848	hypothetical protein	-	1e+1	At5g04470	SIM (SIAMESE)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.46	8e-139	494	Triticum aestivum	Ta.3274.1.S1_at	AY543538.1	-	-	7e-1	At4g19270	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Vitis vinifera	1617223_at	CF403517	-	-	2e+1	At5g35470	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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