Gene omics information

Query gene ID	Zm.17366.1.S1_s_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.17366.1.S1_s_at	CK371241	-	-	1e+1	At5g20060	phospholipase/carboxylesterase family protein	S.X.	H.G.	Please select
0.92	99.2	Zm.17628.1.S1_at	CN845468	-	-	6e-17	At2g34560	katanin, putative	S.X.	H.G.	Please select
0.67	85.8	Zm.6962.1.S1_at	CA404020	sorbitol dehydrogenase	-	2e-1	At5g51970	sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative	S.X.	H.G.	Please select
0.67	85.8	Zm.8865.1.A1_at	BM267927	hypothetical protein LOC100191271	-	3e-9	At5g35460	unknown protein	S.X.	H.G.	Please select
0.57	75.1	Zm.15542.1.S1_at	CD219383	-	-	2e-2	At4g29080	PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)	S.X.	H.G.	Please select
0.53	69.1	Zm.38.1.S1_at	M60215.1	ser/thr protein phosphatase1	-	1e-12	At2g29400	TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)	S.X.	H.G.	Please select
0.32	33.4	Zm.6863.2.A1_at	CF637783	hypothetical protein LOC100193970	-	7e-67	At1g48410	AGO1 (ARGONAUTE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
26.7	99.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.2	99.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.7	99.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.1	99.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e-1	34	Zm.15223.1.A1_at	BM335001	-	-	1e+1	At3g27940	LBD26 (LOB DOMAIN-CONTAINING PROTEIN 26)	C.G.	S.X.	Please select
0.03	1e+0	32	Zm.18098.1.A1_at	CK347304	-	-	7e-6	At5g24110	WRKY30	C.G.	S.X.	Please select
0.04	1e+0	32	Zm.17781.1.A1_at	CK370654	-	-	1e+1	At1g69530	ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)	C.G.	S.X.	Please select
0.03	1e+0	32	Zm.17361.1.S1_at	CK370908	-	-	5e-19	At3g55320	PGP20 (P-GLYCOPROTEIN 20)	C.G.	S.X.	Please select
0.00	1e+0	32	Zm.1395.1.S1_at	AY061805.1	defective kernel1	-	2e-100	At1g55350	DEK1 (DEFECTIVE KERNEL 1)	C.G.	S.X.	Please select
0.01	6e+0	30	ZmAffx.1217.1.S1_s_at	40794996-164	-	-	3e-76	Atmg00030	-	C.G.	S.X.	Please select
0.02	6e+0	30	Zm.9732.1.S1_at	AY108025.1	drought-induced protein 1	-	6e-1	At4g17800	DNA-binding protein-related	C.G.	S.X.	Please select
0.03	6e+0	30	Zm.9743.1.A1_at	CF627519	hypothetical protein LOC100274749	-	7e+0	At3g14930	HEME1	C.G.	S.X.	Please select
0.02	6e+0	30	Zm.9030.1.A1_at	BM381725	39S ribosomal protein L47	-	7e+0	At5g06500	AGL96 (AGAMOUS-LIKE 96)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+1	30	Arabidopsis thaliana	At5g20060	832128	phospholipase/carboxylesterase family protein	F:hydrolase activity, carboxylesterase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	1e+0	34	Glycine max	GmaAffx.10024.1.S1_at	BM891037	-	-	8e-1	At5g15460	MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)	C.G.	S.X.	Please select
0.05	6e+0	30	Hordeum vulgare	baak3d17_at	baak3d17	-	-	4e+0	At1g26762	unknown protein	C.G.	S.X.	Please select
0.09	2e-6	54	Oryza sativa	OsAffx.28727.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	1e+0	34	Populus trichocarpa	PtpAffx.219148.1.S1_at	pmrna34985	hypothetical protein	-	3e+1	At5g53820	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	9e-1	34	Triticum aestivum	Ta.12048.1.A1_at	BQ171480	-	-	7e-1	At1g17370	UBP1B (oligouridylate binding protein 1B)	C.G.	S.X.	Please select
0.06	4e+0	30	Vitis vinifera	1609102_x_at	CF206211.1	-	-	5e-14	Atmg00030	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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