CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.17364.1.A1_at

Gene name hsp20/alpha crystallin family protein

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.0 Zm.17364.1.A1_at CK371178 hsp20/alpha crystallin family protein - 5e+0 At5g09560 KH domain-containing protein S.X. H.G.
0.73 89.9 Zm.2520.1.A1_at AW400289 hypothetical protein LOC100191754 - 5e-21 At3g49680 BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3) S.X. H.G.
0.71 88.2 Zm.5608.1.A1_at AY107668.1 - - 8e+0 At4g17650 aromatic-rich family protein S.X. H.G.
0.56 74.4 Zm.1961.1.A1_at BM379423 Glutathione S-transferase12 - 2e+0 At4g26620 sucrase-related S.X. H.G.
0.46 58.4 Zm.5373.1.S1_at BF728005 hypothetical protein LOC100276438 - 1e+0 At5g26170 WRKY50 S.X. H.G.
0.44 55.7 Zm.4016.1.S1_at CF244580 hypothetical protein LOC100193710 - 9e-1 At5g64720 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.9 99.9 GSM320443 protocol: mRNA - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.3 99.1 GSM253257 ZM_2d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
17.2 99.1 GSM253258 ZM_2d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
16.4 99.0 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
14.6 98.9 GSM253276 ZM_8d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
14.5 98.9 GSM253275 ZM_8d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
14.4 98.9 GSM253256 ZM_2d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
11.3 98.5 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
8.9 98.2 GSM253262 ZM_4d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
8.3 98.0 GSM253263 ZM_4d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-2 38 Zm.5412.1.A1_at CF635537 hypothetical protein LOC100280167 - 3e-6 At4g02630 protein kinase family protein C.G. S.X.
0.04 4e-2 38 Zm.3693.1.A1_at AI065909 16.9 kDa class I heat shock protein 1 - 3e-8 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) C.G. S.X.
0.03 1e-1 36 Zm.9092.1.A1_at BM266516 hypothetical protein LOC100278247 - 1e+0 At1g25260 acidic ribosomal protein P0-related C.G. S.X.
0.04 1e-1 36 Zm.8176.1.A1_a_at AY107848.1 - - 4e+0 At4g04423 endo-1,3(4)-beta-glucanase C.G. S.X.
0.04 1e-1 36 Zm.8176.1.A1_at AY107848.1 hypothetical protein LOC100280367 - 4e+0 At4g04423 endo-1,3(4)-beta-glucanase C.G. S.X.
0.04 1e-1 36 Zm.8176.1.S1_at AY107848.1 - - 4e+0 At4g04423 endo-1,3(4)-beta-glucanase C.G. S.X.
0.03 1e-1 36 Zm.311.1.A1_at BM268583 18 kda heat shock protein18a - 7e+0 At5g20630 GER3 (GERMIN 3) C.G. S.X.
0.01 1e-1 36 Zm.1921.1.S1_at AY108469.1 inorganic phosphate transporter 3 - 3e-16 At5g43340 PHT6 C.G. S.X.
0.02 1e-1 36 Zm.16236.1.S1_at CF636722 Hypothetical protein LOC100191422 - 2e+0 At4g29570 cytidine deaminase, putative / cytidine aminohydrolase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e+0 32 Arabidopsis thaliana At5g09560 830815 KH domain-containing protein F:RNA binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PMFO - - - C.G. S.X.
0.03 5e-1 36 Glycine max GmaAffx.58749.1.S1_at BF425356 - - 1e-18 At3g50790 late embryogenesis abundant protein, putative / LEA protein, putative C.G. S.X.
0.26 1e-20 99 Hordeum vulgare Contig13073_at Contig13073 - - 2e+0 At2g11005 glycine-rich protein C.G. S.X.
0.25 3e-40 167 Oryza sativa Os07g0517100 AK099296.1 - Seed maturation protein PM31 1e-1 At3g11820 SYP121 (SYNTAXIN OF PLANTS 121) C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.209478.1.S1_at pmrna18795 hypothetical protein - 7e+0 At5g50740 metal ion binding C.G. S.X.
0.32 1e-22 107 Triticum aestivum Ta.14007.1.S1_at BQ789310 - - 1e+0 At2g11005 glycine-rich protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1606954_at CB339500 - - 1e+1 At5g23090 NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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