Gene omics information

Query gene ID	Zm.17361.1.S1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.58	75.1	Zm.17361.1.S1_at	CK370908	-	-	5e-19	At3g55320	PGP20 (P-GLYCOPROTEIN 20)	S.X.	H.G.	Please select
0.61	79.5	Zm.2768.1.A1_at	AW067159	Hypothetical protein LOC100193535	-	1e+0	At5g04760	myb family transcription factor	S.X.	H.G.	Please select
0.50	65.7	Zm.12977.2.S1_at	AI677017	Hypothetical protein LOC100193319	-	5e-5	At1g15370	-	S.X.	H.G.	Please select
0.40	48.5	Zm.2986.1.A1_at	AF056326.1	low phytic acid1	-	4e-105	At4g39800	MIPS1 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1)	S.X.	H.G.	Please select
0.36	41.3	Zm.5653.1.A1_at	BM074926	-	-	1e-34	At2g37680	-	S.X.	H.G.	Please select
0.36	41.3	Zm.6468.1.A1_at	AI692046	hypothetical protein LOC100277167	-	1e-3	At1g14440	AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31)	S.X.	H.G.	Please select
0.33	36.0	Zm.12511.1.S1_at	AW062063	hypothetical protein LOC100276976	-	5e+0	At5g53110	-	S.X.	H.G.	Please select
0.31	31.6	Zm.12936.1.A1_at	AY108987.1	-	-	7e-1	At3g21338	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.9	99.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.7	99.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.0	99.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.8	99.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.1	99.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.9	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.7	99.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.4	99.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	36	Zm.2780.1.A1_at	CF057723	hypothetical protein LOC100278371	-	4e-1	At1g14270	CAAX amino terminal protease family protein	C.G.	S.X.	Please select
0.03	3e+0	32	ZmAffx.1129.1.S1_at	AW330590	-	-	2e+0	At1g68870	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	32	ZmAffx.1129.1.A1_at	AW330590	-	-	2e+0	At1g68870	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	32	Zm.17781.1.A1_at	CK370654	-	-	1e+1	At1g69530	ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)	C.G.	S.X.	Please select
0.03	3e+0	32	Zm.17366.1.S1_s_at	CK371241	-	-	1e+1	At5g20060	phospholipase/carboxylesterase family protein	C.G.	S.X.	Please select
0.03	3e+0	32	Zm.14869.1.A1_s_at	AI586666	hypothetical protein LOC100276376	-	5e+0	At4g12800	PSAL (photosystem I subunit L)	C.G.	S.X.	Please select
0.03	3e+0	32	Zm.14869.1.A1_at	AI586666	hypothetical protein LOC100276376	-	5e+0	At4g12800	PSAL (photosystem I subunit L)	C.G.	S.X.	Please select
0.01	1e+1	30	Zm.984.1.A1_at	BE638872	-	-	6e-2	At1g12380	unknown protein	C.G.	S.X.	Please select
0.02	1e+1	30	Zm.9743.1.A1_at	CF627519	hypothetical protein LOC100274749	-	7e+0	At3g14930	HEME1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	5e-19	95	Arabidopsis thaliana	At3g55320	824698	PGP20 (P-GLYCOPROTEIN 20)	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:nucleus, plasma membrane;BOMFAPV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	1e-7	57	Glycine max	GmaAffx.72800.2.S1_at	BM954341	-	-	7e-36	At3g55320	PGP20 (P-GLYCOPROTEIN 20)	C.G.	S.X.	Please select
0.29	4e-58	224	Hordeum vulgare	Contig20549_at	Contig20549	-	-	2e-27	At2g39480	PGP6 (P-GLYCOPROTEIN 6)	C.G.	S.X.	Please select
0.10	5e-42	173	Oryza sativa	Os.25416.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-3	44	Populus trichocarpa	PtpAffx.220540.1.S1_at	pmrna36944	hypothetical protein	-	2e+1	At2g42590	GRF9 (GENERAL REGULATORY FACTOR 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.62	0	648	Triticum aestivum	TaAffx.113111.1.S1_at	CA617925	-	-	2e-20	At3g55320	PGP20 (P-GLYCOPROTEIN 20)	C.G.	S.X.	Please select
0.03	4e-1	34	Vitis vinifera	1617976_at	CF372118	-	-	7e-1	At3g61590	HWS (HAWAIIAN SKIRT)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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